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Vinod Kumar Yadav
Vinod Kumar Yadav
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Year
Genome-Wide Computational and Expression Analyses Reveal G-Quadruplex DNA Motifs as Conserved cis-Regulatory Elements in Human and Related Species
A Verma, K Halder, R Halder, VK Yadav, P Rawal, RK Thakur, F Mohd, ...
Journal of medicinal chemistry 51 (18), 5641-5649, 2008
2452008
QuadBase: genome-wide database of G4 DNA—occurrence and conservation in human, chimpanzee, mouse and rat promoters and 146 microbes
VK Yadav, JK Abraham, P Mani, R Kulshrestha, S Chowdhury
Nucleic acids research 36 (suppl_1), D381-D385, 2007
1612007
Evidence of genome-wide G4 DNA-mediated gene expression in human cancer cells
A Verma, VK Yadav, R Basundra, A Kumar, S Chowdhury
Nucleic acids research 37 (13), 4194-4204, 2009
1582009
The Tandem Duplicator Phenotype Is a Prevalent Genome-Wide Cancer Configuration Driven by Distinct Gene Mutations
Francesca Menghi, Floris P Barthel, Vinod Yadav, Ming Tang, Bo Ji, Zhonghui ...
Cancer Cell 18 (S1535-6108), 30265-4., 2018
146*2018
Genome-wide study predicts promoter-G4 DNA motifs regulate selective functions in bacteria: radioresistance of D. radiodurans involves G4 DNA-mediated …
N Beaume, R Pathak, VK Yadav, S Kota, HS Misra, HK Gautam, ...
Nucleic acids research 41 (1), 76-89, 2013
1202013
Expression Profiling of Macrophages Reveals Multiple Populations with Distinct Biological Roles in an Immunocompetent Orthotopic Model of Lung Cancer
Joanna M Poczobutt, Subhajyoti De, Vinod K Yadav, Teresa T Nguyen, Howard Li ...
The Journal of Immunology, 2016
1082016
The tandem duplicator phenotype as a distinct genomic configuration in cancer
F Menghi, K Inaki, XY Woo, PA Kumar, KR Grzeda, A Malhotra, V Yadav, ...
Proceedings of the National Academy of Sciences 113 (17), E2373-E2382, 2016
992016
DNA damage-induced ephrin-B2 reverse signaling promotes chemoresistance and drives EMT in colorectal carcinoma harboring mutant p53.
S K Alam, V K Yadav, S Bajaj, A Datta, S K Dutta, M Bhattacharyya, S ...
Cell Death Differ, 2015
96*2015
Genome-wide analyses of recombination prone regions predict role of DNA structural motif in recombination
P Mani, VK Yadav, SK Das, S Chowdhury
PloS one 4 (2), e4399, 2009
932009
Lung cancer biomarkers: State of the art
S Subramaniam, RK Thakur, VK Yadav, R Nanda, S Chowdhury, ...
Journal of carcinogenesis 12, 2013
912013
An assessment of computational methods for estimating purity and clonality using genomic data derived from heterogeneous tumor tissue samples
VK Yadav, S De
Briefings in bioinformatics 16 (2), 232-241, 2015
822015
Zinc-finger transcription factors are associated with guanine quadruplex motifs in human, chimpanzee, mouse and rat promoters genome-wide
P Kumar, VK Yadav, A Baral, P Kumar, D Saha, S Chowdhury
Nucleic acids research 39 (18), 8005-8016, 2011
712011
Quadruplex-single nucleotide polymorphisms (Quad-SNP) influence gene expression difference among individuals
A Baral, P Kumar, R Halder, P Mani, VK Yadav, A Singh, SK Das, ...
Nucleic acids research 40 (9), 3800-3811, 2012
702012
The landscape of somatic mutations in protein coding genes in apparently benign human tissues carries signatures of relaxed purifying selection
Vinod Kumar Yadav, James DeGregori, Subhajyoti De
Nucleic Acid Res., 2016
632016
SomVarIUS: Somatic variant identification from unpaired tissue samples
Kyle S. Smith, Vinod K. Yadav, Shanshan Pei, Daniel A. Pollyea, Craig T ...
Bioinformatics, 2015
55*2015
Non-metastatic 2 (NME2)-mediated suppression of lung cancer metastasis involves transcriptional regulation of key cell adhesion factor vinculin
Thakur RK, Yadav VK, Kumar A, Singh A, Pal K, Hoeppner L, Saha D, Purohit G ...
Nucleic Acids Res, 2014
482014
IMPACT: Whole-Exome Sequencing Analysis Pipeline of Integrating Molecular Profiles with Actionable Therapeutics in Clinical Samples
Jennifer Hintzsche, Jihye Kim, Vinod Yadav, Carol Amato, Steven E Robinson ...
JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION, 2016
432016
Rational Design of a Parthenolide-based Drug Regimen that Selectively Eradicates Acute Myelogenous Leukemia Stem Cells.
J Biol Chem., [Epub ahead of print], 2016
402016
Signatures of accelerated somatic evolution in gene promoters in multiple cancer types.
Smith KS, Yadav VK, Pedersen BS, Shaknovich RS, Geraci MW, Pollard KS, De S
Nucleic Acids Research, 2015
392015
Metastases suppressor NME2 associates with telomere ends and telomerase and reduces telomerase activity within cells
A Kar, D Saha, G Purohit, A Singh, P Kumar, VK Yadav, P Kumar, ...
Nucleic acids research 40 (6), 2554-2565, 2012
342012
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