Hamidreza Chitsaz
Hamidreza Chitsaz
Colorado State University
Verified email at chitsazlab.org - Homepage
Title
Cited by
Cited by
Year
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ...
GigaScience 2 (1), 2047-217X-2-10, 2013
5972013
Time-optimal paths for a Dubins airplane
H Chitsaz, SM LaValle
2007 46th IEEE conference on decision and control, 2379-2384, 2007
2412007
Efficient de novo assembly of single-cell bacterial genomes from short-read data sets
H Chitsaz, JL Yee-Greenbaum, G Tesler, MJ Lombardo, CL Dupont, ...
Nature biotechnology 29 (10), 915-921, 2011
2132011
Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum
JS McLean, MJ Lombardo, JH Badger, A Edlund, M Novotny, ...
Proceedings of the National Academy of Sciences 110 (26), E2390-E2399, 2013
1522013
Minimum Wheel-Rotation Paths for Differential-Drive Mobile Robots Among Piecewise Smooth Obstacles
H Chitsaz, SM LaValle
IEEE Conference on Robotics and Automation (ICRA), 2718 - 2723, 2007
127*2007
Minimum wheel-rotation paths for differential-drive mobile robots
H Chitsaz, SM LaValle, DJ Balkcom, MT Mason
The International Journal of Robotics Research 28 (1), 66-80, 2009
1192009
Minimum wheel-rotation paths for differential-drive mobile robots
H Chitsaz, SM LaValle, DJ Balkcom, MT Mason
Robotics and Automation, 2006. ICRA 2006. Proceedings 2006 IEEE …, 2006
1192006
A partition function algorithm for interacting nucleic acid strands
H Chitsaz, R Salari, SC Sahinalp, R Backofen
Bioinformatics 25 (12), i365-i373, 2009
1142009
Single-cell genome and metatranscriptome sequencing reveal metabolic interactions of an alkane-degrading methanogenic community
M Embree, H Nagarajan, N Movahedi, H Chitsaz, K Zengler
The ISME journal 8 (4), 757-767, 2014
1032014
SEQuel: improving the accuracy of genome assemblies
R Ronen, C Boucher, H Chitsaz, P Pevzner
Bioinformatics 28 (12), i188-i196, 2012
672012
A fast vision system for middle size robots in robocup
M Jamzad, BS Sadjad, VS Mirrokni, M Kazemi, H Chitsaz, A Heydarnoori, ...
Robot Soccer World Cup, 71-80, 2001
632001
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species. Gigascience 2: 10
KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ...
doi 10.1186/2047-217X-2-10, 2013
362013
biRNA: Fast RNA-RNA binding sites prediction
H Chitsaz, R Backofen, SC Sahinalp
International Workshop on Algorithms in Bioinformatics, 25-36, 2009
362009
De novo co-assembly of bacterial genomes from multiple single cells
NS Movahedi, E Forouzmand, H Chitsaz
2012 IEEE International Conference on Bioinformatics and Biomedicine, 1-5, 2012
322012
DNA methylation regulates discrimination of enhancers from promoters through a H3K4me1-H3K4me3 seesaw mechanism
A Sharifi-Zarchi, D Gerovska, K Adachi, M Totonchi, H Pezeshk, RJ Taft, ...
BMC genomics 18 (1), 964, 2017
302017
Exact Pareto-Optimal Coordination of Two Translating Polygonal Robots on a Cyclic Roadmap
H Chitsaz, SM LaValle, JM O'Kane
20th Canadian Conference on Computational Geometry (CCCG), 2008
27*2008
Exact pareto-optimal coordination of two translating polygonal robots on an acyclic roadmap
H Chitsaz, JM O'Kane, SM LaValle
IEEE International Conference on Robotics and Automation, 2004. Proceedings …, 2004
272004
Machine learning and network analysis of molecular dynamics trajectories reveal two chains of Red/Ox-specific residue interactions in human protein disulfide isomerase
R Karamzadeh, MH Karimi-Jafari, A Sharifi-Zarchi, H Chitsaz, ...
Scientific reports 7 (1), 1-11, 2017
262017
Distilled Single-Cell Genome Sequencing and De Novo Assembly for Sparse Microbial Communities
Z Taghavi, NS Movahedi, S Draghici, H Chitsaz
Bioinformatics 29 (19), 2395-2401, 2013
142013
Generalizing the Dubins and Reeds-Shepp cars: fastest paths for bounded-velocity mobile robots
AA Furtuna, DJ Balkcom, H Chitsaz, P Kavathekar
2008 IEEE International Conference on Robotics and Automation, 2533-2539, 2008
142008
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Articles 1–20