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Characterization of RNA in exosomes secreted by human breast cancer cell lines using next-generation sequencing
P Jenjaroenpun, Y Kremenska, VM Nair, M Kremenskoy, B Joseph, ...
PeerJ 1, e201, 2013
Ecotopic viral integration site 1 (EVI1) regulates multiple cellular processes important for cancer and is a synergistic partner for FOS protein in invasive tumors
EA Bard-Chapeau, J Jeyakani, CH Kok, J Muller, BQ Chua, J Gunaratne, ...
Proceedings of the National Academy of Sciences 109 (6), 2168-2173, 2012
Quantitative model of R-loop forming structures reveals a novel level of RNA–DNA interactome complexity
T Wongsurawat, P Jenjaroenpun, CK Kwoh, V Kuznetsov
Nucleic acids research 40 (2), e16-e16, 2012
Complete genomic and transcriptional landscape analysis using third-generation sequencing: a case study of Saccharomyces cerevisiae CEN.PK113-7D
P Jenjaroenpun, T Wongsurawat, R Pereira, P Patumcharoenpol, ...
Nucleic acids research 46 (7), e38-e38, 2018
Integrative analysis of the human cis -antisense gene pairs, miRNAs and their transcription regulation patterns
OV Grinchuk, P Jenjaroenpun, YL Orlov, J Zhou, VA Kuznetsov
Nucleic acids research 38 (2), 534-547, 2010
Contrasting expression patterns of coding and noncoding parts of the human genome upon oxidative stress
A Giannakakis, J Zhang, P Jenjaroenpun, S Nama, N Zainolabidin, ...
Scientific reports 5, 9737, 2015
Case of microcephaly after congenital infection with Asian lineage Zika virus, Thailand
T Wongsurawat, N Athipanyasilp, P Jenjaroenpun, SR Jun, B Kaewnapan, ...
Emerging infectious diseases 24 (9), 1758, 2018
R-loops in proliferating cells but not in the brain: implications for AOA2 and other autosomal recessive ataxias
AJ Yeo, OJ Becherel, JE Luff, JK Cullen, T Wongsurawat, ...
PLoS One 9 (3), e90219, 2014
Duplex stem-loop-containing quadruplex motifs in the human genome: a combined genomic and structural study
KW Lim, P Jenjaroenpun, ZJ Low, ZJ Khong, YS Ng, VA Kuznetsov, ...
Nucleic acids research 43 (11), 5630-5646, 2015
TTS Mapping: integrative WEB tool for analysis of triplex formation target DNA Sequences, G-quadruplets and non-protein coding regulatory DNA elements in the …
P Jenjaroenpun, VA Kuznetsov
BMC genomics 10 (S3), S9, 2009
QmRLFS-finder: a model, web server and stand-alone tool for prediction and analysis of R-loop forming sequences
P Jenjaroenpun, T Wongsurawat, SP Yenamandra, VA Kuznetsov
Nucleic acids research 43 (W1), W527-W534, 2015
Role of genomic architecture in the expression dynamics of long noncoding RNAs during differentiation of human neuroblastoma cells
AO Batagov, AA Yarmishyn, P Jenjaroenpun, JZ Tan, Y Nishida, ...
BMC systems biology 7 (S3), S11, 2013
Transposon insertional mutagenesis in mice identifies human breast cancer susceptibility genes and signatures for stratification
L Chen, P Jenjaroenpun, AMC Pillai, AV Ivshina, GS Ow, M Efthimios, ...
Proceedings of the National Academy of Sciences 114 (11), E2215-E2224, 2017
R-loopDB: a database for R-loop forming sequences (RLFS) and R-loops
P Jenjaroenpun, T Wongsurawat, S Sutheeworapong, VA Kuznetsov
Nucleic acids research 45 (D1), D119-D127, 2017
Rapid sequencing of multiple RNA viruses in their native form
T Wongsurawat, P Jenjaroenpun, MK Taylor, J Lee, AL Tolardo, ...
Frontiers in microbiology 10, 260, 2019
Single-cell gene expression analysis reveals regulators of distinct cell subpopulations among developing human neurons
J Wang, P Jenjaroenpun, A Bhinge, VE Angarica, A Del Sol, I Nookaew, ...
Genome research 27 (11), 1783-1794, 2017
Sense-antisense gene-pairs in breast cancer and associated pathological pathways
OV Grinchuk, E Motakis, SP Yenamandra, GS Ow, P Jenjaroenpun, ...
Oncotarget 6 (39), 42197, 2015
The TTSMI database: a catalog of triplex target DNA sites associated with genes and regulatory elements in the human genome
P Jenjaroenpun, CS Chew, TP Yong, K Choowongkomon, ...
Nucleic acids research 43 (D1), D110-D116, 2015
Toward predictive R-loop computational biology: genome-scale prediction of R-loops reveals their association with complex promoter structures, G-quadruplexes and …
VA Kuznetsov, V Bondarenko, T Wongsurawat, SP Yenamandra, ...
Nucleic acids research 46 (15), 7566-7585, 2018
PARP1 is up-regulated in non-small cell lung cancer tissues in the presence of the cyanobacterial toxin microcystin
PL Apopa, L Alley, RB Penney, K Arnaoutakis, MA Steliga, S Jeffus, ...
Frontiers in microbiology 9, 1757, 2018
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