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Arkady Khodursky
Arkady Khodursky
Unknown affiliation
Verified email at umn.edu
Title
Cited by
Cited by
Year
Comparative Gene Expression Profiles Following UV Exposure in Wild-Type and SOS-Deficient Escherichia coli
J Courcelle, A Khodursky, B Peter, PO Brown, PC Hanawalt
Genetics 158 (1), 41-64, 2001
10492001
Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays
JA Bernstein, AB Khodursky, PH Lin, S Lin-Chao, SN Cohen
Proceedings of the National Academy of Sciences 99 (15), 9697-9702, 2002
9992002
Persisters: a distinct physiological state of E. coli
D Shah, Z Zhang, AB Khodursky, N Kaldalu, K Kurg, K Lewis
BMC microbiology 6, 1-9, 2006
7582006
Nitrogen regulatory protein C-controlled genes of Escherichia coli: Scavenging as a defense against nitrogen limitation
DP Zimmer, E Soupene, HL Lee, VF Wendisch, AB Khodursky, BJ Peter, ...
Proceedings of the National Academy of Sciences 97 (26), 14674-14679, 2000
4682000
Topoisomerase IV is a target of quinolones in Escherichia coli.
AB Khodursky, EL Zechiedrich, NR Cozzarelli
Proceedings of the National Academy of Sciences 92 (25), 11801-11805, 1995
4601995
Overflow Metabolism in Escherichia coli during Steady-State Growth: Transcriptional Regulation and Effect of the Redox Ratio
GN Vemuri, E Altman, DP Sangurdekar, AB Khodursky, MA Eiteman
Applied and environmental microbiology 72 (5), 3653-3661, 2006
4202006
Roles of topoisomerases in maintaining steady-state DNA supercoiling in Escherichia coli
EL Zechiedrich, AB Khodursky, S Bachellier, R Schneider, D Chen, ...
Journal of Biological Chemistry 275 (11), 8103-8113, 2000
3922000
Genomic transcriptional response to loss of chromosomal supercoiling in Escherichia coli
BJ Peter, J Arsuaga, AM Breier, AB Khodursky, PO Brown, NR Cozzarelli
Genome biology 5, 1-16, 2004
3602004
Adaptation to famine: a family of stationary-phase genes revealed by microarray analysis
TH Tani, A Khodursky, RM Blumenthal, PO Brown, RG Matthews
Proceedings of the National Academy of Sciences 99 (21), 13471-13476, 2002
3052002
DNA microarray analysis of gene expression in response to physiological and genetic changes that affect tryptophan metabolism in Escherichia coli
AB Khodursky, BJ Peter, NR Cozzarelli, D Botstein, PO Brown, ...
Proceedings of the National Academy of Sciences 97 (22), 12170-12175, 2000
2962000
Topoisomerase IV, not gyrase, decatenates products of site-specific recombination inEscherichia coli
EL Zechiedrich, AB Khodursky, NR Cozzarelli
Genes & development 11 (19), 2580-2592, 1997
2791997
Analysis of topoisomerase function in bacterial replication fork movement: use of DNA microarrays
AB Khodursky, BJ Peter, MB Schmid, J DeRisi, D Botstein, PO Brown, ...
Proceedings of the National Academy of Sciences 97 (17), 9419-9424, 2000
2602000
The mechanism of inhibition of topoisomerase IV by quinolone antibacterials
AB Khodursky, NR Cozzarelli
Journal of Biological Chemistry 273 (42), 27668-27677, 1998
2101998
Spatial patterns of transcriptional activity in the chromosome of Escherichia coli
KS Jeong, J Ahn, AB Khodursky
Genome biology 5, 1-10, 2004
1942004
A note on using permutation-based false discovery rate estimates to compare different analysis methods for microarray data
Y Xie, W Pan, AB Khodursky
Bioinformatics 21 (23), 4280-4288, 2005
1642005
Evolutionary genomics of ecological specialization
S Zhong, A Khodursky, DE Dykhuizen, AM Dean
Proceedings of the National Academy of Sciences 101 (32), 11719-11724, 2004
1112004
RNA profiles reveal signatures of future health and disease in pregnancy
M Rasmussen, M Reddy, R Nolan, J Camunas-Soler, A Khodursky, ...
Nature 601 (7893), 422-427, 2022
1092022
Isolation of Escherichia coli mRNA and comparison of expression using mRNA and total RNA on DNA microarrays
VF Wendisch, DP Zimmer, A Khodursky, B Peter, N Cozzarelli, S Kustu
Analytical biochemistry 290 (2), 205-213, 2001
1042001
A classification based framework for quantitative description of large-scale microarray data
DP Sangurdekar, F Srienc, AB Khodursky
Genome biology 7, 1-17, 2006
932006
Gene expression patterns of sulfur starvation in Synechocystis sp. PCC 6803
Z Zhang, ND Pendse, KN Phillips, JB Cotner, A Khodursky
BMC genomics 9, 1-14, 2008
892008
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Articles 1–20