| A deep learning genome-mining strategy for biosynthetic gene cluster prediction GD Hannigan, D Prihoda, A Palicka, J Soukup, O Klempir, L Rampula, ... Nucleic acids research 47 (18), e110-e110, 2019 | 207 | 2019 |
| BioPhi: A platform for antibody design, humanization, and humanness evaluation based on natural antibody repertoires and deep learning D Prihoda, J Maamary, A Waight, V Juan, L Fayadat-Dilman, D Svozil, ... MAbs 14 (1), 2020203, 2022 | 78 | 2022 |
| The application potential of machine learning and genomics for understanding natural product diversity, chemistry, and therapeutic translatability D Prihoda, JM Maritz, O Klempir, D Dzamba, CH Woelk, DJ Hazuda, ... Natural Product Reports 38 (6), 1100-1108, 2021 | 34 | 2021 |
| Mutation maker, an open source oligo design platform for protein engineering K Hiraga, P Mejzlik, M Marcisin, N Vostrosablin, A Gromek, J Arnold, ... ACS Synthetic Biology 10 (2), 357-370, 2021 | 7 | 2021 |
| A machine learning strategy for the identification of key in silico descriptors and prediction models for IgG monoclonal antibody developability properties AB Waight, D Prihoda, R Shrestha, K Metcalf, M Bailly, M Ancona, ... MAbs 15 (1), 2248671, 2023 | 4 | 2023 |
| Identifying biosynthetic gene clusters GD Hannigan, D Prihoda, J Soukup, CH Woelk, DA Bitton US Patent App. 16/362,236, 2020 | 4 | 2020 |
| mRNAid, an open-source platform for therapeutic mRNA design and optimization strategies N Vostrosablin, S Lim, P Gopal, K Brazdilova, S Parajuli, X Wei, A Gromek, ... NAR Genomics and Bioinformatics 6 (1), lqae028, 2024 | 2 | 2024 |
| TraceTrack, an open-source software for batch processing, alignment and visualization of sanger sequencing chromatograms K Brazdilova, D Prihoda, Q Ton, H Klock, DA Bitton Bioinformatics Advances 3 (1), vbad083, 2023 | 1 | 2023 |
| A deep learning genome-mining strategy improves biosynthetic gene cluster prediction GD Hannigan, D Prihoda, A Palicka, J Soukup, O Klempir, L Rampula, ... bioRxiv, 500694, 2018 | 1 | 2018 |
