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Bruno Aranda
Bruno Aranda
Senior Software Engineer, European Bioinformatics Institute
Verified email at ebi.ac.uk
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Year
The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases
S Orchard, M Ammari, B Aranda, L Breuza, L Briganti, F Broackes-Carter, ...
Nucleic acids research 42 (D1), D358-D363, 2014
18562014
The IntAct molecular interaction database in 2012
S Kerrien, B Aranda, L Breuza, A Bridge, F Broackes-Carter, C Chen, ...
Nucleic acids research 40 (D1), D841-D846, 2012
12692012
IntAct—open source resource for molecular interaction data
S Kerrien, Y Alam-Faruque, B Aranda, I Bancarz, A Bridge, C Derow, ...
Nucleic acids research 35 (suppl_1), D561-D565, 2007
9402007
The IntAct molecular interaction database in 2010
B Aranda, P Achuthan, Y Alam-Faruque, I Armean, A Bridge, C Derow, ...
Nucleic acids research 38 (suppl_1), D525-D531, 2010
8022010
Protein interaction data curation: the International Molecular Exchange (IMEx) consortium
S Orchard, S Kerrien, S Abbani, B Aranda, J Bhate, S Bidwell, A Bridge, ...
Nature methods 9 (4), 345-350, 2012
5682012
PSICQUIC and PSISCORE: accessing and scoring molecular interactions
B Aranda, H Blankenburg, S Kerrien, FSL Brinkman, A Ceol, E Chautard, ...
Nature methods 8 (7), 528-529, 2011
3142011
Broadening the horizon–level 2.5 of the HUPO-PSI format for molecular interactions
S Kerrien, S Orchard, L Montecchi-Palazzi, B Aranda, AF Quinn, N Vinod, ...
BMC biology 5, 1-11, 2007
3092007
Analyzing protein–protein interaction networks
GCKW Koh, P Porras, B Aranda, H Hermjakob, SE Orchard
Journal of proteome research 11 (4), 2014-2031, 2012
1952012
BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains
T Katayama, MD Wilkinson, KF Aoki-Kinoshita, S Kawashima, ...
Journal of biomedical semantics 5, 1-13, 2014
692014
The PSI semantic validator: a framework to check MIAPE compliance of proteomics data
L Montecchi‐Palazzi, S Kerrien, F Reisinger, B Aranda, AR Jones, ...
Proteomics 9 (22), 5112-5119, 2009
602009
The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows
T Katayama, K Arakawa, M Nakao, K Ono, KF Aoki-Kinoshita, ...
Journal of biomedical semantics 1, 1-19, 2010
542010
The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies
T Katayama, MD Wilkinson, G Micklem, S Kawashima, A Yamaguchi, ...
Journal of biomedical semantics 4, 1-17, 2013
492013
MINT and IntAct contribute to the Second BioCreative challenge: serving the text-mining community with high quality molecular interaction data
A Chatr-aryamontri, S Kerrien, J Khadake, S Orchard, A Ceol, L Licata, ...
Genome Biology 9, 1-8, 2008
392008
The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications
T Katayama, MD Wilkinson, R Vos, T Kawashima, S Kawashima, ...
Journal of biomedical semantics 2, 1-18, 2011
302011
Facelets Essentials: Guide to JavaServer Faces View Definition Framework
B Aranda, Z Wadia
Apress, 2008
92008
The BioCreative II-critical assessment for information extraction in biology challenge
M Krallinger, A Morgan, L Smith, F Leitner, L Tanabe, J Wilbur, ...
Genome Biology 9, S1, 2008
92008
Corrigendum: Protein interaction data curation: The International Molecular Exchange (IMEx) consortium (Nature Methods (2012) 9,(345-350))
SE Orchard, S Kerrien, S Abbani, B Aranda, J Bhate, SL Bidwell, ...
Nature Methods 9 (6), 626, 2012
62012
The publication and database deposition of molecular interaction data
S Orchard, B Aranda, H Hermjakob
Current Protocols in Protein Science 60 (1), 25.3. 1-25.3. 13, 2010
52010
IntAct-serving the text-mining community with high quality molecular interaction data
J Khadake, B Aranda, C Derow, R Huntley, S Kerrien, C Leroy
Second BioCreative Challenge Evaluation Workshop, 61, 2007
22007
Journal of Biomedical Semantics
T Katayama, MD Wilkinson, G Micklem, S Kawashima, A Yamaguchi, ...
Journal of Biomedical Semantics 1, 8, 2010
12010
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Articles 1–20