| HiRIEF LC-MS enables deep proteome coverage and unbiased proteogenomics RMM Branca, LM Orre, HJ Johansson, V Granholm, M Huss, ... Nature methods 11 (1), 59-62, 2014 | 213 | 2014 |
| Fast and accurate database searches with MS-GF+ Percolator V Granholm, S Kim, JCF Navarro, E Sjolund, RD Smith, L Kall Journal of proteome research 13 (2), 890-897, 2014 | 77 | 2014 |
| Quality assessments of peptide–spectrum matches in shotgun proteomics V Granholm, L Käll Proteomics 11 (6), 1086-1093, 2011 | 46 | 2011 |
| On using samples of known protein content to assess the statistical calibration of scores assigned to peptide-spectrum matches in shotgun proteomics V Granholm, WS Noble, L Käll Journal of proteome research 10 (5), 2671-2678, 2011 | 41 | 2011 |
| Determining the calibration of confidence estimation procedures for unique peptides in shotgun proteomics V Granholm, JF Navarro, WS Noble, L Käll Journal of proteomics 80, 123-131, 2013 | 39 | 2013 |
| A cross-validation scheme for machine learning algorithms in shotgun proteomics V Granholm, WS Noble, L Käll BMC bioinformatics 13 (16), 1-8, 2012 | 35 | 2012 |
| Membrane protein shaving with thermolysin can be used to evaluate topology predictors M Bendz, M Skwark, D Nilsson, V Granholm, S Cristobal, L Käll, ... Proteomics 13 (9), 1467-1480, 2013 | 15 | 2013 |
| Mass fingerprinting of complex mixtures: protein inference from high-resolution peptide masses and predicted retention times L Moruz, MR Hoopmann, M Rosenlund, V Granholm, RL Moritz, L Kall Journal of proteome research 12 (12), 5730-5741, 2013 | 13 | 2013 |
| Design and conformational analysis of natively folded β‐hairpin peptides stabilized by nucleobase interactions R Uozumi, T Takahashi, T Yamazaki, V Granholm, H Mihara Peptide Science 94 (6), 830-842, 2010 | 3 | 2010 |
| Statistical mass spectrometry-based proteomics K Ma, O Vitek, AI Nesvizhskii, K Jeong, S Kim, N Bandeira, V Granholm, ... BMC Bioinformatics 13 (16), S10, 2012 | 2 | 2012 |
| The accuracy of statistical confidence estimates in shotgun proteomics V Granholm Department of Biochemistry and Biophysics, Stockholm University, 2014 | | 2014 |
| P3. 04 Genome Wide Proteomics Using Peptide High Resolution Isoelectric Focusing Hirief-Ms Allows Detection New Human Gene Models J Lehtiö, M Branca, H Johansson, M Orre, V Granholm, J Forshed, ... Annals of Oncology 23, v33-v34, 2012 | | 2012 |
