Ziva Ramsak
Ziva Ramsak
Research Assistant, National Institute of Biology
Verifierad e-postadress på nib.si - Startsida
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Optimising droplet digital PCR analysis approaches for detection and quantification of bacteria: a case study of fire blight and potato brown rot
T Dreo, M Pirc, Ž Ramšak, J Pavšič, M Milavec, J Žel, K Gruden
Analytical and bioanalytical chemistry 406 (26), 6513-6528, 2014
1092014
Assessment of toxicity and genotoxicity of low doses of 5-fluorouracil in zebrafish (Danio rerio) two-generation study
R Kovács, Z Csenki, K Bakos, B Urbányi, Á Horváth, V Garaj-Vrhovac, ...
Water research 77, 201-212, 2015
772015
GoMapMan: integration, consolidation and visualization of plant gene annotations within the MapMan ontology
Ž Ramšak, Š Baebler, A Rotter, M Korbar, I Mozetič, B Usadel, K Gruden
Nucleic Acids Research 42 (D1), D1167-D1175, 2014
742014
System level analysis of cacao seed ripening reveals a sequential interplay of primary and secondary metabolism leading to polyphenol accumulation and preparation of stress …
L Wang, T Nägele, H Doerfler, L Fragner, P Chaturvedi, E Nukarinen, ...
The Plant Journal 87 (3), 318-332, 2016
462016
Bimodal dynamics of primary metabolism-related responses in tolerant potato-Potato virus Y interaction
T Stare, Ž Ramšak, A Blejec, K Stare, N Turnšek, W Weckwerth, ...
BMC genomics 16 (1), 1-17, 2015
412015
Heterogeneous glioblastoma cell cross-talk promotes phenotype alterations and enhanced drug resistance
H Motaln, A Koren, K Gruden, Ž Ramšak, C Schichor, TT Lah
Oncotarget 6 (38), 40998, 2015
402015
Salicylic acid perturbs sRNA-gibberellin regulatory network in immune response of potato to potato virus Y infection
M Križnik, M Petek, D Dobnik, Ž Ramšak, Š Baebler, S Pollmann, ...
Frontiers in plant science 8, 2192, 2017
202017
Salicylic acid perturbs sRNA-gibberellin regulatory network in immune response of potato to potato virus Y infection
M Križnik, M Petek, D Dobnik, Ž Ramšak, Š Baebler, S Pollmann, ...
Frontiers in plant science 8, 2192, 2017
202017
Enabling reusability of plant phenomic datasets with MIAPPE 1.1
EA Papoutsoglou, D Faria, D Arend, E Arnaud, IN Athanasiadis, I Chaves, ...
New Phytologist 227 (1), 260-273, 2020
142020
Network modeling unravels mechanisms of crosstalk between ethylene and salicylate signaling in potato
Ž Ramšak, A Coll, T Stare, O Tzfadia, Š Baebler, Y Van de Peer, K Gruden
Plant physiology 178 (1), 488-499, 2018
122018
Cultivar-specific transcriptome and pan-transcriptome reconstruction of tetraploid potato
M Petek, M Zagorščak, Ž Ramšak, S Sanders, Š Tomaž, E Tseng, ...
Scientific data 7 (1), 1-15, 2020
42020
Multiomics analysis of tolerant interaction of potato with potato virus Y
T Stare, Ž Ramšak, M Križnik, K Gruden
Scientific data 6 (1), 1-11, 2019
32019
DiNAR: revealing hidden patterns of plant signalling dynamics using Differential Network Analysis in R
M Zagorščak, A Blejec, Ž Ramšak, M Petek, T Stare, K Gruden
Plant methods 14 (1), 1-9, 2018
12018
Erratum to: Bimodal dynamics of primary metabolism-related responses in tolerant potato-Potato virus Y interaction
T Stare, Ž Ramšak, A Blejec, K Stare, N Turnšek, W Weckwerth, ...
BMC genomics 18 (1), 1-2, 2017
12017
Lastnosti mutiranih različic listeriolizina O
Ž Ramšak
Univerza v Ljubljani, Biotehniška fakulteta, 2009
12009
Orchestration of the stilbene synthase gene family and their regulators by subgroup 2 MYB genes
L Orduña, M Li, D Navarro-Payá, C Zhang, Ž Ramšak, K Gruden, J Höll, ...
bioRxiv, 2020.12. 31.424746, 2021
2021
Comparative physiological and proteomic signatures reveal contrasting stay green and senescence phenotypes in drought tolerant and susceptible pearl millet and wheat genotypes
A Ghatak, P Chaturvedi, G Bachmann, L Valledor, Ž Ramšak, ...
Frontiers in Plant Science 11, 1965, 2020
2020
Interactive exploration of heterogeneous biological networks with Biomine Explorer
V Podpečan, Ž Ramšak, K Gruden, H Toivonen, N Lavrač
Bioinformatics 35 (24), 5385-5388, 2019
2019
Exploring the landscape of existing motifs in networks of Arabidopsis thaliana and Solanum tuberosum under biotic stress
Ž Ramšak, A Coll, T Lukan, K Gruden
2019 IS-MPMI XVIII Congress, 2019
2019
The CHARME" Advanced Big Data Training School for Life Sciences": an example of good practices for training on current bioinformatics challenges
Y Hoang, J Pfeil, M Zagoršcak, E Zdravevski, Ž Ramšak, SK Schulze, ...
EMBnet. journal 24, 1-7, 2019
2019
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Artiklar 1–20