Imad Abugessaisa
Imad Abugessaisa
RIKEN Center for Integrative Medical Sciences (IMS)
Verified email at ki.se - Homepage
TitleCited byYear
Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells
E Arner, CO Daub, K Vitting-Seerup, R Andersson, B Lilje, F Drablřs, ...
Science 347 (6225), 1010-1014, 2015
3312015
An atlas of human long non-coding RNAs with accurate 5′ ends
CC Hon, JA Ramilowski, J Harshbarger, N Bertin, OJL Rackham, J Gough, ...
Nature 543 (7644), 199, 2017
3162017
Gateways to the FANTOM5 promoter level mammalian expression atlas
M Lizio, J Harshbarger, H Shimoji, J Severin, T Kasukawa, S Sahin, ...
Genome biology 16 (1), 22, 2015
2982015
Data integration in the era of omics: current and future challenges
D Gomez-Cabrero, I Abugessaisa, D Maier, A Teschendorff, ...
BMC systems biology 8 (2), I1, 2014
2582014
An integrated expression atlas of miRNAs and their promoters in human and mouse
D De Rie, I Abugessaisa, T Alam, E Arner, P Arner, H Ashoor, G Ĺström, ...
Nature biotechnology 35 (9), 872, 2017
1052017
Update of the FANTOM web resource: high resolution transcriptome of diverse cell types in mammals
M Lizio, J Harshbarger, I Abugessaisa, S Noguchi, A Kondo, J Severin, ...
Nucleic acids research, gkw995, 2016
432016
FANTOM5 transcriptome catalog of cellular states based on Semantic MediaWiki
I Abugessaisa, H Shimoji, S Sahin, A Kondo, J Harshbarger, M Lizio, ...
Database 2016, 2016
342016
FANTOM5 CAGE profiles of human and mouse samples
S Noguchi, T Arakawa, S Fukuda, M Furuno, A Hasegawa, F Hori, ...
Scientific data 4, 170112, 2017
292017
Systems Medicine: from molecular features and models to the clinic in COPD
D Gomez-Cabrero, J Menche, I Cano, I Abugessaisa, ...
Journal of translational medicine 12 (2), S4, 2014
272014
Computational biomedicine
V Diaz
Oxford University Press, 2014
242014
Knowledge discovery in road accidents database-integration of visual and automatic data mining methods
I Abugessaisa
International Journal of Public Information Systems 4 (1), 2008
172008
Laboratory biomarkers and frailty: presentation of the FRAILOMIC initiative
G Lippi, P Jansen-Duerr, J Vińa, A Durrance-Bagale, I Abugessaisa, ...
Clinical Chemistry and Laboratory Medicine (CCLM), 2015
132015
Accelerating translational research by clinically driven development of an informatics platform–a case study
I Abugessaisa, S Saevarsdottir, G Tsipras, S Lindblad, C Sandin, ...
PLoS One 9 (9), e104382, 2014
122014
Implementation of the CDC translational informatics platform-from genetic variants to the national Swedish Rheumatology Quality Register
I Abugessaisa, D Gomez-Cabrero, O Snir, S Lindblad, L Klareskog, ...
Journal of translational medicine 11 (1), 85, 2013
122013
SCPortalen: human and mouse single-cell centric database
I Abugessaisa, S Noguchi, M Böttcher, A Hasegawa, T Kouno, S Kato, ...
Nucleic acids research 46 (D1), D781-D787, 2017
112017
STATegra EMS: an Experiment Management System for complex next-generation omics experiments
R Hernández-de-Diego, N Boix-Chova, D Gómez-Cabrero, J Tegner, ...
BMC systems biology 8 (2), S9, 2014
112014
FANTOM5 CAGE profiles of human and mouse reprocessed for GRCh38 and GRCm38 genome assemblies
I Abugessaisa, S Noguchi, A Hasegawa, J Harshbarger, A Kondo, M Lizio, ...
Scientific data 4, 170107, 2017
102017
Ontological approach to modeling information systems
IEA Abugessaisa, A Sivertun
The Fourth International Conference onComputer and Information Technology …, 2004
92004
’t Hoen PA, Tatum Z, Thompson M, Toyoda T, Wright DW, Daub CO, Itoh M, Carninci P, Hayashizaki Y, Forrest AR, Kawaji H. Gateways to the FANTOM5 promoter level mammalian …
M Lizio, J Harshbarger, H Shimoji, J Severin, T Kasukawa, S Sahin, ...
Genome Biol 16, 22, 2015
72015
GeoTest: A Testing Environment for Swedish Geodata
A Östman, I Abugessaisa, S Tanzilli, X He, M El-Mekawy
GSDI 11 World Conference, Rotterdam, June 15-19, 2009, 13 s., 2009
72009
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