Imad Abugessaisa
Imad Abugessaisa
RIKEN Center for Integrative Medical Sciences (IMS)
Verified email at ki.se - Homepage
Title
Cited by
Cited by
Year
An atlas of human long non-coding RNAs with accurate 5′ ends
CC Hon, JA Ramilowski, J Harshbarger, N Bertin, OJL Rackham, J Gough, ...
Nature 543 (7644), 199-204, 2017
4062017
Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells
E Arner, CO Daub, K Vitting-Seerup, R Andersson, B Lilje, F Drabløs, ...
Science 347 (6225), 1010-1014, 2015
3622015
Gateways to the FANTOM5 promoter level mammalian expression atlas
M Lizio, J Harshbarger, H Shimoji, J Severin, T Kasukawa, S Sahin, ...
Genome biology 16 (1), 22, 2015
3612015
Data integration in the era of omics: current and future challenges
D Gomez-Cabrero, I Abugessaisa, D Maier, A Teschendorff, ...
BMC systems biology 8 (2), I1, 2014
2972014
An integrated expression atlas of miRNAs and their promoters in human and mouse
D De Rie, I Abugessaisa, T Alam, E Arner, P Arner, H Ashoor, G Åström, ...
Nature biotechnology 35 (9), 872, 2017
1472017
Update of the FANTOM web resource: high resolution transcriptome of diverse cell types in mammals
M Lizio, J Harshbarger, I Abugessaisa, S Noguchi, A Kondo, J Severin, ...
Nucleic acids research, gkw995, 2016
562016
FANTOM5 CAGE profiles of human and mouse samples
S Noguchi, T Arakawa, S Fukuda, M Furuno, A Hasegawa, F Hori, ...
Scientific data 4, 170112, 2017
432017
FANTOM5 transcriptome catalog of cellular states based on Semantic MediaWiki
I Abugessaisa, H Shimoji, S Sahin, A Kondo, J Harshbarger, M Lizio, ...
Database 2016, 2016
372016
Systems Medicine: from molecular features and models to the clinic in COPD
D Gomez-Cabrero, J Menche, I Cano, I Abugessaisa, ...
Journal of translational medicine 12 (2), S4, 2014
292014
Computational biomedicine
V Diaz
Oxford University Press, 2014
242014
C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution
T Kouno, J Moody, ATJ Kwon, Y Shibayama, S Kato, Y Huang, M Böttcher, ...
Nature communications 10 (1), 1-12, 2019
182019
SCPortalen: human and mouse single-cell centric database
I Abugessaisa, S Noguchi, M Böttcher, A Hasegawa, T Kouno, S Kato, ...
Nucleic acids research 46 (D1), D781-D787, 2018
182018
Knowledge discovery in road accidents database-integration of visual and automatic data mining methods
I Abugessaisa
International Journal of Public Information Systems 4 (1), 2008
172008
FANTOM5 CAGE profiles of human and mouse reprocessed for GRCh38 and GRCm38 genome assemblies
I Abugessaisa, S Noguchi, A Hasegawa, J Harshbarger, A Kondo, M Lizio, ...
Scientific data 4, 170107, 2017
162017
Laboratory biomarkers and frailty: presentation of the FRAILOMIC initiative
G Lippi, P Jansen-Duerr, J Viña, A Durrance-Bagale, I Abugessaisa, ...
Clinical Chemistry and Laboratory Medicine (CCLM), 2015
152015
STATegra EMS: an Experiment Management System for complex next-generation omics experiments
R Hernández-de-Diego, N Boix-Chova, D Gómez-Cabrero, J Tegner, ...
BMC systems biology 8 (2), S9, 2014
142014
Implementation of the CDC translational informatics platform-from genetic variants to the national Swedish Rheumatology Quality Register
I Abugessaisa, D Gomez-Cabrero, O Snir, S Lindblad, L Klareskog, ...
Journal of translational medicine 11 (1), 85, 2013
122013
Incidence and risk factors for adalimumab and infliximab anti-drug antibodies in rheumatoid arthritis: a European retrospective multicohort analysis
J Quistrebert, S Hässler, D Bachelet, C Mbogning, A Musters, PP Tak, ...
Seminars in arthritis and rheumatism 48 (6), 967-975, 2019
112019
Accelerating translational research by clinically driven development of an informatics platform–a case study
I Abugessaisa, S Saevarsdottir, G Tsipras, S Lindblad, C Sandin, ...
PLoS One 9 (9), 2014
112014
Update of the FANTOM web resource: expansion to provide additional transcriptome atlases
M Lizio, I Abugessaisa, S Noguchi, A Kondo, A Hasegawa, CC Hon, ...
Nucleic acids research 47 (D1), D752-D758, 2019
102019
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