| Mining differential top-k co-expression patterns from time course comparative gene expression datasets YC Liu, CP Cheng, VS Tseng BMC bioinformatics 14, 1-13, 2013 | 37 | 2013 |
| Discovering relational-based association rules with multiple minimum supports on microarray datasets YC Liu, CP Cheng, VS Tseng Bioinformatics 27 (22), 3142-3148, 2011 | 34 | 2011 |
| Network-based analysis identifies epigenetic biomarkers of esophageal squamous cell carcinoma progression CP Cheng, IY Kuo, H Alakus, KA Frazer, O Harismendy, YC Wang, ... Bioinformatics 30 (21), 3054-3061, 2014 | 16 | 2014 |
| Aligning to the sample-specific reference sequence to optimize the accuracy of next-generation sequencing analysis for hepatitis B virus WC Liu, CP Lin, CP Cheng, CH Ho, KL Lan, JH Cheng, CJ Yen, ... Hepatology International 10, 147-157, 2016 | 15 | 2016 |
| Analysis of precore/core covariances associated with viral kinetics and genotypes in hepatitis B e antigen-positive chronic hepatitis B patients CP Cheng, PF Lee, WC Liu, IC Wu, CY Chin, TT Chang, VS Tseng PloS one 7 (2), e32553, 2012 | 9 | 2012 |
| DeF-GPU: Efficient and effective deletions finding in hepatitis B viral genomic DNA using a GPU architecture CP Cheng, KL Lan, WC Liu, TT Chang, VS Tseng Methods 111, 56-63, 2016 | 7 | 2016 |
| An efficient method for mining cross-timepoint gene regulation sequential patterns from time course gene expression datasets CP Cheng, YC Liu, YL Tsai, VS Tseng BMC bioinformatics 14, 1-12, 2013 | 7 | 2013 |
| Discovering clinical biomarkers of chronic hepatitis B by mining mutation hotspots CP Cheng, PF Lee, CY Chin, WC Liu, IC Wu, TT Chang, VS Tseng 2011 International Conference on Technologies and Applications of Artificial …, 2011 | 6 | 2011 |
| MiningABs: mining associated biomarkers across multi-connected gene expression datasets CP Cheng, C DeBoever, KA Frazer, YC Liu, VS Tseng BMC bioinformatics 15, 1-13, 2014 | 2 | 2014 |
| CTGR-Span: Efficient mining of cross-timepoint gene regulation sequential patterns from microarray datasets CP Cheng, YL Tsai, VS Tseng 2012 IEEE International Conference on Bioinformatics and Biomedicine, 1-4, 2012 | 2 | 2012 |
