Kazushi Fujimoto
Kazushi Fujimoto
Verified email at chembio.nagoya-u.ac.jp
Title
Cited by
Cited by
Year
MODYLAS: A highly parallelized general-purpose molecular dynamics simulation program for large-scale systems with long-range forces calculated by fast multipole method (FMM …
Y Andoh, N Yoshii, K Fujimoto, K Mizutani, H Kojima, A Yamada, ...
Journal of Chemical Theory and Computation 9 (7), 3201-3209, 2013
1002013
All-atom molecular dynamics calculation study of entire poliovirus empty capsids in solution
Y Andoh, N Yoshii, A Yamada, K Fujimoto, H Kojima, K Mizutani, ...
The Journal of chemical physics 141 (16), 10B611_1, 2014
552014
Free energy profiles for penetration of methane and water molecules into spherical sodium dodecyl sulfate micelles obtained using the thermodynamic integration method combined …
K Fujimoto, N Yoshii, S Okazaki
The Journal of chemical physics 136 (1), 014511, 2012
292012
Why Is Poly (oxyethylene) soluble in water? Evidence from the thermodynamic profile of the conformational equilibria of 1, 2-dimethoxyethane and dimethoxymethane revealed by …
R Wada, K Fujimoto, M Kato
The Journal of Physical Chemistry B 118 (42), 12223-12231, 2014
202014
Molecular dynamics study of the formation mechanisms of ionic SDS and nonionic C12E8 micelles and n-dodecane droplets
S Kawada, M Komori, K Fujimoto, N Yoshii, S Okazaki
Chemical Physics Letters 646, 36-40, 2016
172016
Molecular dynamics study of solubilization of immiscible solutes by a micelle: Free energy of transfer of alkanes from water to the micelle core by thermodynamic integration method
K Fujimoto, N Yoshii, S Okazaki
The Journal of chemical physics 133 (7), 074511, 2010
152010
A molecular dynamics study of the breathing and deforming modes of the spherical ionic SDS and nonionic C12E8 micelles
L Wang, K Fujimoto, N Yoshii, S Okazaki
The Journal of chemical physics 144 (3), 034903, 2016
112016
Molecular dynamics study of the potential of mean force of SDS aggregates
S Kawada, K Fujimoto, N Yoshii, S Okazaki
The Journal of Chemical Physics 147 (8), 084903, 2017
102017
Detailed Structural Analysis of a Self‐Assembled Vesicular Amphiphilic NCN‐Pincer Palladium Complex by Using Wide‐Angle X‐Ray Scattering and Molecular Dynamics Calculations
G Hamasaka, T Muto, Y Andoh, K Fujimoto, K Kato, M Takata, S Okazaki, ...
Chemistry–A European Journal 23 (6), 1291-1298, 2017
92017
Molecular dynamics study of the structure of anionic SDS, cationic DTAC, zwitterionic DDAO, and nonionic C12E8 spherical micelles in solution
N Yoshii, K Fujimoto, S Okazaki
Journal of Molecular Liquids 217, 99-102, 2016
82016
Molecular dynamics study of free energy of transfer of alcohol and amine from water phase to the micelle by thermodynamic integration method
K Fujimoto, N Yoshii, S Okazaki
The Journal of chemical physics 137 (9), 094902, 2012
82012
All-atom molecular dynamics study of impact fracture of glassy polymers. I: Molecular mechanism of brittleness of PMMA and ductility of PC
K Fujimoto, Z Tang, W Shinoda, S Okazaki
Polymer 178, 121570, 2019
72019
G-Protein/β-arrestin-linked fluctuating network of G-protein-coupled receptors for predicting drug efficacy and bias using short-term molecular dynamics simulation
O Ichikawa, K Fujimoto, A Yamada, S Okazaki, K Yamazaki
PloS one 11 (5), e0155816, 2016
72016
Molecular dynamics of polyrotaxane in solution investigated by quasi-elastic neutron scattering and molecular dynamics simulation: sliding motion of rings on polymer
Y Yasuda, Y Hidaka, K Mayumi, T Yamada, K Fujimoto, S Okazaki, ...
Journal of the American Chemical Society 141 (24), 9655-9663, 2019
62019
Spherical harmonics analysis of surface density fluctuations of spherical ionic SDS and nonionic C12E8 micelles: A molecular dynamics study
N Yoshii, Y Nimura, K Fujimoto, S Okazaki
The Journal of Chemical Physics 147 (3), 034906, 2017
62017
Molecular dynamics study of the aggregation rate for zwitterionic dodecyldimethylamine oxide and cationic dodecyltrimethylammonium chloride micelles
K Fujimoto, Y Kubo, S Kawada, N Yoshii, S Okazaki
Molecular Simulation 43 (13-16), 1331-1337, 2017
52017
MODYLAS: A highly parallelized general‐purpose molecular dynamics simulation program
N Yoshii, Y Andoh, K Fujimoto, H Kojima, A Yamada, S Okazaki
International Journal of Quantum Chemistry 115 (5), 342-348, 2015
42015
Enthalpy and entropy of transfer of alkanes from water phase to the micelle core
K Fujimoto, N Yoshii, S Okazaki
Molecular Simulation 38 (5), 342-345, 2012
32012
Development of dissociative force field for all‐atomistic molecular dynamics calculation of fracture of polymers
K Fujimoto, RS Payal, T Hattori, W Shinoda, M Nakagaki, S Sakaki, ...
Journal of computational chemistry 40 (29), 2571-2576, 2019
22019
A molecular dynamics study of local pressures and interfacial tensions of SDS micelles and dodecane droplets in water
M Kitabata, K Fujimoto, N Yoshii, S Okazaki
The Journal of Chemical Physics 144 (22), 224701, 2016
22016
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Articles 1–20