Follow
Giulia Guidi
Giulia Guidi
Assistant Professor at Cornell University, Lawrence Berkeley National Laboratory
Verified email at cornell.edu - Homepage
Title
Cited by
Cited by
Year
Logan: High-performance gpu-based x-drop long-read alignment
A Zeni, G Guidi, M Ellis, N Ding, MD Santambrogio, S Hofmeyr, A Buluç, ...
2020 IEEE International Parallel and Distributed Processing Symposium (IPDPS …, 2020
482020
On how to improve fpga-based systems design productivity via sdaccel
G Guidi, E Reggiani, L Di Tucci, G Durelli, M Blott, MD Santambrogio
2016 IEEE international parallel and distributed processing symposium …, 2016
392016
Distributed many-to-many protein sequence alignment using sparse matrices
O Selvitopi, S Ekanayake, G Guidi, GA Pavlopoulos, A Azad, A Buluç
SC20: International Conference for High Performance Computing, Networking …, 2020
262020
diBELLA: Distributed long read to long read alignment
M Ellis, G Guidi, A Buluç, L Oliker, K Yelick
Proceedings of the 48th International Conference on Parallel Processing, 1-11, 2019
222019
BELLA: Berkeley efficient long-read to long-read aligner and overlapper
G Guidi, M Ellis, D Rokhsar, K Yelick, A Buluç
SIAM Conference on Applied and Computational Discrete Algorithms (ACDA21 …, 2021
212021
The parallelism motifs of genomic data analysis
K Yelick, A Buluç, M Awan, A Azad, B Brock, R Egan, S Ekanayake, ...
Philosophical Transactions of the Royal Society A 378 (2166), 20190394, 2020
202020
10 years later: cloud computing is closing the performance gap
G Guidi, M Ellis, A Buluç, K Yelick, D Culler
Companion of the ACM/SPEC International Conference on Performance …, 2021
172021
Parallel string graph construction and transitive reduction for de novo genome assembly
G Guidi, O Selvitopi, M Ellis, L Oliker, K Yelick, A Buluç
2021 IEEE International Parallel and Distributed Processing Symposium (IPDPS …, 2021
122021
Space Efficient Sequence Alignment for SRAM-Based Computing: X-Drop on the Graphcore IPU
L Burchard, MX Zhao, J Langguth, A Buluç, G Guidi
Proceedings of the International Conference for High Performance Computing …, 2023
52023
Distributed-Memory Parallel Contig Generation for De Novo Long-Read Genome Assembly
G Guidi, G Raulet, D Rokhsar, L Oliker, K Yelick, A Buluç
Proceedings of the 51st International Conference on Parallel Processing, 1-11, 2022
42022
Profax: A hardware acceleration of a protein folding algorithm
G Guidi, L Di Tucci, MD Santambrogio
2016 IEEE 2nd International Forum on Research and Technologies for Society …, 2016
42016
Extreme-scale many-against-many protein similarity search
O Selvitopi, S Ekanayake, G Guidi, MG Awan, GA Pavlopoulos, A Azad, ...
SC22: International Conference for High Performance Computing, Networking …, 2022
32022
HUGenomics: A support to personalized medicine research
L Di Tucci, G Guidi, S Notargiacomo, L Cerina, A Scolari, ...
2017 IEEE 3rd International Forum on Research and Technologies for Society …, 2017
12017
Efficient long-read overlap detection and alignment for De Novo genome assembly
G GUIDI
Politecnico di Milano, 2017
12017
Designing Efficient SIMD Kernels for High Performance Sequence Alignment
DT Popovici, MG Awan, G Guidi, R Egan, S Hofmeyr, L Oliker, K Yelick
2023 IEEE International Parallel and Distributed Processing Symposium …, 2023
2023
Parallel Algorithms for De Novo Long Read Genome Assembly via Sparse Linear Algebra
G Guidi
University of California, Berkeley, 2022
2022
BuDDI: A Declarative Bloom Language for CALM Programming
R Garcia, G Guidi
arXiv preprint arXiv:2109.08192, 2021
2021
The system can't perform the operation now. Try again later.
Articles 1–17