Matthew Pocock

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	All	Since 2016
Citations	9226	2295
h-index	23	18
i10-index	35	26

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Anil WipatProfessor of Bioinformatics Newcastle UniversityVerified email at ncl.ac.uk
Phillip LordLecturer in Computing Science, Newcastle UniversityVerified email at newcastle.ac.uk
Goksel MisirliKeele UniversityVerified email at keele.ac.uk
Jacob BealBBN TechnologiesVerified email at bbn.com
Carole GobleProfessor of Computer Science, University of ManchesterVerified email at cs.man.ac.uk
Herbert M SauroUniversity of WashingtonVerified email at u.washington.edu
Robert StevensProfessor of Computer Science, Department of Computer Science, university of manchesterVerified email at manchester.ac.uk
Duncan HullLecturer, Department of Computer Science, University of Manchester, UKVerified email at manchester.ac.uk
Jason E StajichProfessor, University of California-RiversideVerified email at ucr.edu
Hilmar LappDirector of Informatics, Center for Genomic and Computational Biology, Duke UniversityVerified email at duke.edu
Ewan BirneyDirector, EMBL-EBIVerified email at ebi.ac.uk
John H GennariBiomedical & Health Informatics, University of WashingtonVerified email at uw.edu
Chris WroeHealth Informatician, BMJ GroupVerified email at bmjgroup.com
Lincoln SteinDirector of Informatics and Biocomputing, Ontario Institute for Cancer Research Verified email at oicr.on.ca
Mark D WilkinsonBBVA-UPM Industry Chair on Biotechnology and Isaac Peral Distinguished Researcher, UPMVerified email at illuminae.com
Christopher J MungallLawrence Berkeley National LaboratoryVerified email at lbl.gov
Guy-Bart StanProfessor of BioSystems Engineering and Control, RAEng Chair, Bioengineering, Imperial CollegeVerified email at imperial.ac.uk
Swapnil BhatiaCatalog Technologies Inc.Verified email at catalogdna.com
Andreas DrägerJunior Professor for Computational Systems Biology of Infection and Antimicrobial-ResistanceVerified email at informatik.uni-tuebingen.de
Andreas PrlicUCSD / SDSCVerified email at sdsc.edu

Matthew Pocock

Computing Science, Newcastle University

Verified email at ncl.ac.uk

bioinformatics semantic web synthetic biology


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Taverna: a tool for the composition and enactment of bioinformatics workflows T Oinn, M Addis, J Ferris, D Marvin, M Senger, M Greenwood, T Carver, ... Bioinformatics 20 (17), 3045-3054, 2004	1898	2004
The Bioperl toolkit: Perl modules for the life sciences JE Stajich, D Block, K Boulez, SE Brenner, SA Chervitz, C Dagdigian, ... Genome research 12 (10), 1611-1618, 2002	1815	2002
The Ensembl genome database project T Hubbard, D Barker, E Birney, G Cameron, Y Chen, L Clark, T Cox, J Cuff, ... Nucleic acids research 30 (1), 38-41, 2002	1654	2002
Taverna: a tool for building and running workflows of services D Hull, K Wolstencroft, R Stevens, C Goble, MR Pocock, P Li, T Oinn Nucleic acids research 34 (suppl_2), W729-W732, 2006	1224	2006
Taverna: lessons in creating a workflow environment for the life sciences T Oinn, M Greenwood, M Addis, MN Alpdemir, J Ferris, K Glover, C Goble, ... Concurrency and Computation: Practice and Experience 18 (10), 1067-1100, 2006	972	2006
BioJava: an open-source framework for bioinformatics RCG Holland, TA Down, M Pocock, A Prlić, D Huen, K James, S Foisy, ... Bioinformatics 24 (18), 2096-2097, 2008	278	2008
Controlled vocabularies and semantics in systems biology M Courtot, N Juty, C Knüpfer, D Waltemath, A Zhukova, A Dräger, ... Molecular systems biology 7 (1), 543, 2011	256	2011
The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology M Galdzicki, KP Clancy, E Oberortner, M Pocock, JY Quinn, CA Rodriguez, ... Nature biotechnology 32 (6), 545-550, 2014	254	2014
SBOL visual: a graphical language for genetic designs JY Quinn, RS Cox III, A Adler, J Beal, S Bhatia, Y Cai, J Chen, K Clancy, ... PLoS biology 13 (12), e1002310, 2015	67	2015
Sharing structure and function in biological design with SBOL 2.0 N Roehner, J Beal, K Clancy, B Bartley, G Misirli, R Grunberg, ... ACS synthetic biology 5 (6), 498-506, 2016	63	2016
Performing statistical analyses on quantitative data in Taverna workflows: an example using R and maxdBrowse to identify differentially-expressed genes from microarray data P Li, JI Castrillo, G Velarde, I Wassink, S Soiland-Reyes, S Owen, ... BMC bioinformatics 9 (1), 1-11, 2008	56	2008
Synthetic biology open language (SBOL) version 2.0. 0 B Bartley, J Beal, K Clancy, G Misirli, N Roehner, E Oberortner, M Pocock, ... Journal of integrative bioinformatics 12 (2), 902-991, 2015	54	2015
BioJava: open source components for bioinformatics M Pocock, T Down, T Hubbard ACM Sigbio Newsletter 20 (2), 10-12, 2000	50	2000
The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows T Katayama, K Arakawa, M Nakao, K Ono, KF Aoki-Kinoshita, ... Journal of biomedical semantics 1 (1), 1-19, 2010	48	2010
The differential gene expression profiles of proximal and distal muscle groups are altered in pre-pathological dysferlin-deficient mice M von der Hagen, SH Laval, LM Cree, F Haldane, M Pocock, I Wappler, ... Neuromuscular Disorders 15 (12), 863-877, 2005	47	2005
An integrated dataset for in silico drug discovery SJ Cockell, J Weile, P Lord, C Wipat, D Andriychenko, M Pocock, ... J Integr Bioinform 7 (3), 116, 2010	34	2010
Synthetic biology open language (SBOL) version 1.1. 0 M Galdzicki, M Wilson, CA Rodriguez, MR Pocock, E Oberortner, L Adam, ...	33	2012
Synthetic biology open language (SBOL) version 2.2. 0 RS Cox, C Madsen, JA McLaughlin, T Nguyen, N Roehner, B Bartley, ... Journal of integrative bioinformatics 15 (1), 2018	29	2018
The SBOL stack: a platform for storing, publishing, and sharing synthetic biology designs C Madsen, JA McLaughlin, G Mısırlı, M Pocock, K Flanagan, J Hallinan, ... ACS synthetic biology 5 (6), 487-497, 2016	27	2016
libSBOLj 2.0: a java library to support SBOL 2.0 Z Zhang, T Nguyen, N Roehner, G Misirli, M Pocock, E Oberortner, ... IEEE life sciences letters 1 (4), 34-37, 2015	27	2015

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