Eric D. Merkley
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Year
Distance restraints from crosslinking mass spectrometry: mining a molecular dynamics simulation database to evaluate lysine–lysine distances
ED Merkley, S Rysavy, A Kahraman, RP Hafen, V Daggett, JN Adkins
Protein science 23 (6), 747-759, 2014
1752014
Identification and characterization of MtoA: a decaheme c-type cytochrome of the neutrophilic Fe (II)-oxidizing bacterium Sideroxydans lithotrophicus ES-1
J Liu, Z Wang, SM Belchik, MJ Edwards, C Liu, DW Kennedy, ED Merkley, ...
Frontiers in microbiology 3, 37, 2012
1432012
Dynameomics: a comprehensive database of protein dynamics
MW van der Kamp, RD Schaeffer, AL Jonsson, AD Scouras, AM Simms, ...
Structure 18 (4), 423-435, 2010
1422010
The succinated proteome
ED Merkley, TO Metz, RD Smith, JW Baynes, N Frizzell
Mass spectrometry reviews 33 (2), 98-109, 2014
752014
Mutations in global regulators lead to metabolic selection during adaptation to complex environments
G Saxer, MD Krepps, ED Merkley, C Ansong, BLD Kaiser, MT Valovska, ...
PLoS Genet 10 (12), e1004872, 2014
422014
Temperature dependence of the flexibility of thermophilic and mesophilic flavoenzymes of the nitroreductase fold
ED Merkley, WW Parson, V Daggett
Protein Engineering, Design & Selection 23 (5), 327-336, 2010
372010
Cross-linking and mass spectrometry methodologies to facilitate structural biology: finding a path through the maze
ED Merkley, JR Cort, JN Adkins
Journal of structural and functional genomics 14 (3), 77-90, 2013
362013
Live cell chemical profiling of temporal redox dynamics in a photoautotrophic cyanobacterium
NC Sadler, MR Melnicki, MH Serres, ED Merkley, WB Chrisler, EA Hill, ...
ACS chemical biology 9 (1), 291-300, 2014
302014
Mixed-isotope labeling with LC-IMS-MS for characterization of protein–protein interactions by chemical cross-linking
ED Merkley, ES Baker, KL Crowell, DJ Orton, T Taverner, C Ansong, ...
Journal of the American Society for Mass Spectrometry 24 (3), 444-449, 2013
292013
Investigation of Yersinia pestis Laboratory Adaptation through a Combined Genomics and Proteomics Approach
OP Leiser, ED Merkley, BH Clowers, BL Deatherage Kaiser, A Lin, ...
PloS one 10 (11), e0142997, 2015
182015
Thermodynamics of proton dissociations from aqueous glycine at temperatures from 278.15 to 393.15 K, molalities from 0 to 1.0 molˇ kg− 1, and at the pressure 0.35 MPa: Apparent …
SP Ziemer, TL Niederhauser, ED Merkley, JL Price, EC Sorenson, ...
The Journal of Chemical Thermodynamics 38 (4), 467-483, 2006
172006
Thermodynamics of proton dissociations from aqueous l-valine and l-2-amino-n-butanoic acid: apparent molar volumes and apparent molar heat capacities of the protonated cationic …
JL Price, EC Sorenson, ED Merkley, BR McRae, EM Woolley
The Journal of Chemical Thermodynamics 35 (9), 1425-1467, 2003
172003
Applications and challenges of forensic proteomics
ED Merkley, DS Wunschel, KL Wahl, KH Jarman
Forensic science international 297, 350-363, 2019
162019
Changes in Protein Expression Across Laboratory and Field Experiments in Geobacter bemidjiensis
ED Merkley, KC Wrighton, CJ Castelle, BJ Anderson, MJ Wilkins, V Shah, ...
Journal of proteome research 14 (3), 1361-1375, 2015
142015
Ricin-like proteins from the castor plant do not influence liquid chromatography-mass spectrometry detection of ricin in forensically relevant samples
ED Merkley, SC Jenson, JS Arce, AM Melville, OP Leiser, DS Wunschel, ...
Toxicon 140, 18-31, 2017
132017
A temperature‐dependent conformational change of NADH oxidase from Thermus thermophilus HB8
ED Merkley, V Daggett, WW Parson
Proteins: Structure, Function, and Bioinformatics 80 (2), 546-555, 2012
122012
Conformational Changes below the Tm:  Molecular Dynamics Studies of the Thermal Pretransition of Ribonuclease A
ED Merkley, B Bernard, V Daggett
Biochemistry 47 (3), 880-892, 2008
122008
Proteomics goes to court: a statistical foundation for forensic toxin/organism identification using bottom-up proteomics
KH Jarman, NC Heller, SC Jenson, JR Hutchison, BLD Kaiser, SH Payne, ...
Journal of proteome research 17 (9), 3075-3085, 2018
112018
Defending our public biological databases as a global critical infrastructure
J Caswell, JD Gans, N Generous, CM Hudson, E Merkley, C Johnson, ...
Frontiers in bioengineering and biotechnology 7, 58, 2019
72019
Effects of bacterial inactivation methods on downstream proteomic analysis
A Lin, ED Merkley, BH Clowers, JR Hutchison, HW Kreuzer
Journal of microbiological methods 112, 3-10, 2015
72015
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