| Next-generation characterization of the cancer cell line encyclopedia M Ghandi, FW Huang, J Jané-Valbuena, GV Kryukov, CC Lo, ... Nature 569 (7757), 503-508, 2019 | 1740 | 2019 |
| Integrative analysis of single-cell genomics data by coupled nonnegative matrix factorizations Z Duren, X Chen, M Zamanighomi, W Zeng, A Satpathy, H Chang, ... Proceedings of the National Academy of Sciences 115 (30), 7723-7728, 2018 | 122 | 2018 |
| Unsupervised clustering and epigenetic classification of single cells M Zamanighomi, Z Lin, T Daley, X Chen, Z Duren, A Schep, WJ Greenleaf, ... Nature communications 9 (1), 2410, 2018 | 91 | 2018 |
| Simultaneous dimension reduction and adjustment for confounding variation Z Lin, C Yang, Y Zhu, J Duchi, Y Fu, Y Wang, B Jiang, M Zamanighomi, ... Proceedings of the National Academy of Sciences 113 (51), 14662-14667, 2016 | 37 | 2016 |
| Kinematic analysis of the gait of adult sheep during treadmill locomotion: Parameter values, allowable total error, and potential for use in evaluating spinal cord injury S Safayi, ND Jeffery, SK Shivapour, M Zamanighomi, TJ Zylstra, ... Journal of the neurological sciences 358 (1-2), 107-112, 2015 | 31 | 2015 |
| Paralog knockout profiling identifies DUSP4 and DUSP6 as a digenic dependence in MAPK pathway-driven cancers T Ito, MJ Young, R Li, S Jain, A Wernitznig, JM Krill-Burger, CT Lemke, ... Nature genetics 53 (12), 1664-1672, 2021 | 29 | 2021 |
| GEMINI: a variational Bayesian approach to identify genetic interactions from combinatorial CRISPR screens M Zamanighomi, SS Jain, T Ito, D Pal, TP Daley, WR Sellers Genome biology 20, 1-10, 2019 | 26 | 2019 |
| Model-based approach to the joint analysis of single-cell data on chromatin accessibility and gene expression Z Lin, M Zamanighomi, T Daley, S Ma, WH Wong | 17 | 2020 |
| Multiple-access channel with correlated states and cooperating encoders MJ Emadi, M Zamanighomi, MR Aref IET communications 6 (13), 1857-1867, 2012 | 16* | 2012 |
| Predicting transcription factor binding motifs from DNA-binding domains, chromatin accessibility and gene expression data M Zamanighomi, Z Lin, Y Wang, R Jiang, WH Wong Nucleic acids research 45 (10), 5666-5677, 2017 | 13 | 2017 |
| A new method for variable elimination in systems of inequations FS Chaharsooghi, MJ Emadi, M Zamanighomi, MR Aref 2011 IEEE International Symposium on Information Theory Proceedings, 1215-1219, 2011 | 12 | 2011 |
| Multiple-antenna interference channels with real interference alignment and receive antenna joint processing based on simultaneous Diophantine approximation M Zamanighomi, Z Wang IEEE transactions on information theory 60 (8), 4757-4769, 2014 | 10* | 2014 |
| Linear minimum mean-square error estimation based on high-dimensional data with missing values M Zamanighomi, Z Wang, K Slavakis, GB Giannakis 2014 48th Annual Conference on Information Sciences and Systems (CISS), 1-5, 2014 | 10 | 2014 |
| Degrees of freedom region of wireless X networks based on real interference alignment M Zamanighomi, Z Wang IEEE Transactions on Information Theory 62 (4), 1931-1941, 2016 | 9 | 2016 |
| Comparative optimization of combinatorial CRISPR screens R Li, O Klingbeil, D Monducci, MJ Young, DJ Rodriguez, Z Bayyat, ... Nature Communications 13 (1), 2469, 2022 | 3 | 2022 |
| Gene regulatory network inference from perturbed time-series expression data via ordered dynamical expansion of non-steady state actors M Zamanighomi, M Zamanian, M Kimber, Z Wang IEEE/ACM Transactions on Computational Biology and Bioinformatics 15 (4 …, 2015 | 3 | 2015 |
| Estimating high-dimensional covariance matrices with misses for Kronecker product expansion models M Zamanighomi, Z Wang, GB Giannakis 2016 IEEE International Conference on Acoustics, Speech and Signal …, 2016 | 2 | 2016 |
| CLIFF, a bioinformatics software tool to explore molecular differences between two sets of cancer cell lines A Wernitznig, JJ Lipp, T Zichner, D Gerlach, MJ Bauer, T Voss, A Schlattl, ... Cancer Research 80 (16_Supplement), 3227-3227, 2020 | 1 | 2020 |
| Deep plasma proteomics at scale enabling proteogenomic analyses in a lung cancer (NSCLC) study M Zamanighomi, H Guturu, J Wang, A Alavi, T Brown, D Hornburg, ... Cancer Research 82 (12_Supplement), 6339-6339, 2022 | | 2022 |
| Network topology identification based on measured data M Zamanighomi Iowa State University, 2015 | | 2015 |
Wing Hung WongStanford UniversityVerified email at stanford.edu
