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Stefan G Stark
Stefan G Stark
Verified email at inf.ethz.ch - Homepage
Title
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Cited by
Year
Pan-cancer analysis of whole genomes
Nature 578 (7793), 82-93, 2020
1641*2020
Comprehensive analysis of alternative splicing across tumors from 8,705 patients
A Kahles, KV Lehmann, NC Toussaint, M Hüser, SG Stark, ...
Cancer cell 34 (2), 211-224. e6, 2018
6952018
Genomic basis for RNA alterations in cancer
PCAWG Transcriptome Core Group Calabrese Claudia 2 Davidson Natalie R. 3 4 5 ...
Nature 578 (7793), 129-136, 2020
2712020
A global metagenomic map of urban microbiomes and antimicrobial resistance
D Danko, D Bezdan, EE Afshin, S Ahsanuddin, C Bhattacharya, DJ Butler, ...
Cell 184 (13), 3376-3393. e17, 2021
2002021
The Tumor Profiler Study: integrated, multi-omic, functional tumor profiling for clinical decision support
A Irmisch, X Bonilla, S Chevrier, KV Lehmann, F Singer, NC Toussaint, ...
Cancer Cell 39 (3), 288-293, 2021
832021
Learning single-cell perturbation responses using neural optimal transport
C Bunne, SG Stark, G Gut, JS Del Castillo, M Levesque, KV Lehmann, ...
Nature Methods 20 (11), 1759-1768, 2023
492023
SCIM: universal single-cell matching with unpaired feature sets
SG Stark, J Ficek, F Locatello, X Bonilla, S Chevrier, F Singer, G Rätsch, ...
Bioinformatics 36, i919-i927, 2020
432020
Targeting eIF4A-dependent translation of KRAS signaling molecules
K Singh, J Lin, N Lecomte, P Mohan, A Gokce, VR Sanghvi, M Jiang, ...
Cancer research 81 (8), 2002-2014, 2021
232021
PmVAE: Learning interpretable single-cell representations with pathway modules
G Gut, SG Stark, G Rätsch, NR Davidson
bioRxiv, 2021.01. 28.428664, 2021
202021
Genomic basis for RNA alterations revealed by whole-genome analyses of 27 cancer types
C Calabrese, NR Davidson, NA Fonseca, Y He, A Kahles, K Lehmann, ...
152017
Cancer Genome Atlas Research NetworkCancer Genome Atlas Research Network (2018) Comprehensive analysis of alternative splicing across tumors from 8,705 patients
A Kahles, KV Lehmann, NC Toussaint, M Hüser, SG Stark, ...
Cancer Cell 34, 211-224, 0
11
Pan-cancer study of heterogeneous RNA aberrations
NA Fonseca, A Kahles, KV Lehmann, C Calabrese, A Chateigner, ...
bioRxiv, 183889, 2017
102017
Probabilistic clustering of time-evolving distance data
JE Vogt, M Kloft, S Stark, SS Raman, S Prabhakaran, V Roth, G Rätsch
Machine learning 100, 635-654, 2015
62015
Unsupervised extraction of phenotypes from cancer clinical notes for association studies
SG Stark, SL Hyland, MF Pradier, K Lehmann, A Wicki, FP Cruz, JE Vogt, ...
arXiv preprint arXiv:1904.12973, 2019
32019
Which Future Skills Are Critical to Success Today and in the Future? Quantitative and Qualitative Study Based on a Survey of Representatives of German Industrial Firms and …
S Stark
An International Peer-reviewed and Open Access Journal for Business Research …, 2022
22022
Author Correction: Pan-cancer analysis of whole genomes
Nature 614 (7948), E39-E39, 2023
12023
SECEDO: SNV-based subclone detection using ultra-low coverage single-cell DNA sequencing
H Rozhoňová, D Danciu, S Stark, G Rätsch, A Kahles, KV Lehmann
Bioinformatics 38 (18), 4293-4300, 2022
12022
KRAS and RAS signaling network is co-regulated and can be therapeutically blocked by targeting eIF4A dependent translation program.
K Singh, J Lin, N Lecomte, P Mohan, A Gokce, V Sanghvi, GH Olivera, ...
MOLECULAR CANCER RESEARCH 18 (5), 73-74, 2020
12020
Learning single-cell perturbation responses using neural optimal transport (vol 20, pg 1759, 2023)
C Bunne, SG Stark, G Gut, JS del Castillo, M Levesque, KV Lehmann, ...
NATURE METHODS 20 (11), 1830-1830, 2023
2023
Author Correction: Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing
I Cortés-Ciriano, JJK Lee, R Xi, D Jain, YL Jung, L Yang, D Gordenin, ...
Nature genetics 55 (6), 1076-1076, 2023
2023
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