Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020 | 1641* | 2020 |
Comprehensive analysis of alternative splicing across tumors from 8,705 patients A Kahles, KV Lehmann, NC Toussaint, M Hüser, SG Stark, ... Cancer cell 34 (2), 211-224. e6, 2018 | 695 | 2018 |
Genomic basis for RNA alterations in cancer PCAWG Transcriptome Core Group Calabrese Claudia 2 Davidson Natalie R. 3 4 5 ... Nature 578 (7793), 129-136, 2020 | 271 | 2020 |
A global metagenomic map of urban microbiomes and antimicrobial resistance D Danko, D Bezdan, EE Afshin, S Ahsanuddin, C Bhattacharya, DJ Butler, ... Cell 184 (13), 3376-3393. e17, 2021 | 200 | 2021 |
The Tumor Profiler Study: integrated, multi-omic, functional tumor profiling for clinical decision support A Irmisch, X Bonilla, S Chevrier, KV Lehmann, F Singer, NC Toussaint, ... Cancer Cell 39 (3), 288-293, 2021 | 83 | 2021 |
Learning single-cell perturbation responses using neural optimal transport C Bunne, SG Stark, G Gut, JS Del Castillo, M Levesque, KV Lehmann, ... Nature Methods 20 (11), 1759-1768, 2023 | 49 | 2023 |
SCIM: universal single-cell matching with unpaired feature sets SG Stark, J Ficek, F Locatello, X Bonilla, S Chevrier, F Singer, G Rätsch, ... Bioinformatics 36, i919-i927, 2020 | 43 | 2020 |
Targeting eIF4A-dependent translation of KRAS signaling molecules K Singh, J Lin, N Lecomte, P Mohan, A Gokce, VR Sanghvi, M Jiang, ... Cancer research 81 (8), 2002-2014, 2021 | 23 | 2021 |
PmVAE: Learning interpretable single-cell representations with pathway modules G Gut, SG Stark, G Rätsch, NR Davidson bioRxiv, 2021.01. 28.428664, 2021 | 20 | 2021 |
Genomic basis for RNA alterations revealed by whole-genome analyses of 27 cancer types C Calabrese, NR Davidson, NA Fonseca, Y He, A Kahles, K Lehmann, ... | 15 | 2017 |
Cancer Genome Atlas Research NetworkCancer Genome Atlas Research Network (2018) Comprehensive analysis of alternative splicing across tumors from 8,705 patients A Kahles, KV Lehmann, NC Toussaint, M Hüser, SG Stark, ... Cancer Cell 34, 211-224, 0 | 11 | |
Pan-cancer study of heterogeneous RNA aberrations NA Fonseca, A Kahles, KV Lehmann, C Calabrese, A Chateigner, ... bioRxiv, 183889, 2017 | 10 | 2017 |
Probabilistic clustering of time-evolving distance data JE Vogt, M Kloft, S Stark, SS Raman, S Prabhakaran, V Roth, G Rätsch Machine learning 100, 635-654, 2015 | 6 | 2015 |
Unsupervised extraction of phenotypes from cancer clinical notes for association studies SG Stark, SL Hyland, MF Pradier, K Lehmann, A Wicki, FP Cruz, JE Vogt, ... arXiv preprint arXiv:1904.12973, 2019 | 3 | 2019 |
Which Future Skills Are Critical to Success Today and in the Future? Quantitative and Qualitative Study Based on a Survey of Representatives of German Industrial Firms and … S Stark An International Peer-reviewed and Open Access Journal for Business Research …, 2022 | 2 | 2022 |
Author Correction: Pan-cancer analysis of whole genomes Nature 614 (7948), E39-E39, 2023 | 1 | 2023 |
SECEDO: SNV-based subclone detection using ultra-low coverage single-cell DNA sequencing H Rozhoňová, D Danciu, S Stark, G Rätsch, A Kahles, KV Lehmann Bioinformatics 38 (18), 4293-4300, 2022 | 1 | 2022 |
KRAS and RAS signaling network is co-regulated and can be therapeutically blocked by targeting eIF4A dependent translation program. K Singh, J Lin, N Lecomte, P Mohan, A Gokce, V Sanghvi, GH Olivera, ... MOLECULAR CANCER RESEARCH 18 (5), 73-74, 2020 | 1 | 2020 |
Learning single-cell perturbation responses using neural optimal transport (vol 20, pg 1759, 2023) C Bunne, SG Stark, G Gut, JS del Castillo, M Levesque, KV Lehmann, ... NATURE METHODS 20 (11), 1830-1830, 2023 | | 2023 |
Author Correction: Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing I Cortés-Ciriano, JJK Lee, R Xi, D Jain, YL Jung, L Yang, D Gordenin, ... Nature genetics 55 (6), 1076-1076, 2023 | | 2023 |