Följ
Koray Dogan Kaya
Koray Dogan Kaya
PhD, Bioinformatics Scientist
Verifierad e-postadress på alumni.boun.edu.tr
Titel
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Accelerated and improved differentiation of retinal organoids from pluripotent stem cells in rotating-wall vessel bioreactors
T DiStefano, HY Chen, C Panebianco, KD Kaya, MJ Brooks, L Gieser, ...
Stem cell reports 10 (1), 300-313, 2018
1852018
Transcriptome dynamics of developing photoreceptors in three-dimensional retina cultures recapitulates temporal sequence of human cone and rod differentiation revealing cell …
R Kaewkhaw, KD Kaya, M Brooks, K Homma, J Zou, V Chaitankar, M Rao, ...
Stem cells 33 (12), 3504-3518, 2015
1682015
NRL-regulated transcriptome dynamics of developing rod photoreceptors
JW Kim, HJ Yang, MJ Brooks, L Zelinger, G Karakülah, N Gotoh, A Boleda, ...
Cell reports 17 (9), 2460-2473, 2016
1002016
Three-dimensional retinal organoids from mouse pluripotent stem cells mimic in vivo development with enhanced stratification and rod photoreceptor differentiation
HY Chen, KD Kaya, L Dong, A Swaroop
Molecular vision 22, 1077, 2016
932016
Pharmacologic fibroblast reprogramming into photoreceptors restores vision
B Mahato, KD Kaya, Y Fan, N Sumien, RA Shetty, W Zhang, D Davis, ...
Nature 581 (7806), 83-88, 2020
712020
Transcriptome-based molecular staging of human stem cell-derived retinal organoids uncovers accelerated photoreceptor differentiation by 9-cis retinal
KD Kaya, HY Chen, MJ Brooks, RA Kelley, H Shimada, K Nagashima, ...
Molecular vision 25, 663, 2019
682019
Treatment paradigms for retinal and macular diseases using 3-D retina cultures derived from human reporter pluripotent stem cell lines
R Kaewkhaw, M Swaroop, K Homma, J Nakamura, M Brooks, KD Kaya, ...
Investigative ophthalmology & visual science 57 (5), ORSFl1-ORSFl11, 2016
592016
Loss of MACF1 abolishes ciliogenesis and disrupts apicobasal polarity establishment in the retina
HL May-Simera, JD Gumerson, C Gao, M Campos, SM Cologna, T Beyer, ...
Cell reports 17 (5), 1399-1413, 2016
472016
mESAdb: microRNA expression and sequence analysis database
KD Kaya, G Karakülah, CM Yakıcıer, AC Acar, Ö Konu
Nucleic acids research 39 (suppl_1), D170-D180, 2011
472011
Retinal organoids derived from hiPSCs of an AIPL1-LCA patient maintain cytoarchitecture despite reduced levels of mutant AIPL1
D Lukovic, A Artero Castro, KD Kaya, D Munezero, L Gieser, ...
Scientific Reports 10 (1), 5426, 2020
402020
Cone-rod homeobox CRX controls presynaptic active zone formation in photoreceptors of mammalian retina
J Assawachananont, SY Kim, KD Kaya, R Fariss, JE Roger, A Swaroop
Human Molecular Genetics 27 (20), 3555-3567, 2018
182018
Accelerated and improved differentiation of retinal organoids from pluripotent stem cells in rotating-wall vessel bioreactors
TJ DiStefano, HY Chen, C Panebianco, KD Kaya, MJ Brooks, L Gieser, ...
Stem Cell Reports 16 (1), 224, 2021
62021
Retinal pigment epithelium transcriptome analysis in chronic smoking reveals a suppressed innate immune response and activation of differentiation pathways
L Wang, KD Kaya, S Kim, MJ Brooks, J Wang, Y Xin, J Qian, A Swaroop, ...
Free Radical Biology and Medicine 156, 176-189, 2020
32020
MicroRNA sequence and expression database
KD Kaya, G Karakulah, C Yakicier, O Konu
BMC Systems Biology 1, 1-2, 2007
12007
Single-cell profiling identifies a CD8bright CD244bright Natural Killer cell subset that reflects disease activity in HLA-A29-positive birdshot chorioretinopathy
PR Nath, M Maclean, V Nagarajan, JW Lee, M Yakin, A Kumar, H Nadali, ...
medRxiv, 2022.09. 11.22279821, 2022
2022
High dimensional profiling and immune monitoring of Uveitis patients
PR Nath, M Maclean, J Lee, A Kumar, H Nadali, M Yakin, S Kodati, ...
Investigative Ophthalmology & Visual Science 63 (7), 2679-2679, 2022
2022
Restoration of vision by chemically reprogrammed photoreceptors
B Mahato, KD Kaya, Y Fan, N Sumien, R Shetty, D Davis, T Thomas Mock, ...
2019
Three-dimensional retinal organoids from induced pluripotent stem cells derived from rd16 mouse model of CEP290-LCA
H Chen, KD Kaya, CK Jiang, A Mondal, M Brooks, J Kim, M Swaroop, ...
Investigative Ophthalmology & Visual Science 59 (9), 575-575, 2018
2018
RetSeq: Next Generation Sequencing Database for Exploring Retinal Development, Aging and Disease.
KD Kaya, M Brooks, HJ Yang, JW Kim, G Karakulah, A Swaroop
Investigative Ophthalmology & Visual Science 56 (7), 1240-1240, 2015
2015
Multivariate analysis of expression and sequence characteristics of miRNAs
KD Kaya, O Konu, C Yakicier
FEBS JOURNAL 273, 247-247, 2006
2006
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Artiklar 1–20