Jason E. Donald
Jason E. Donald
Agrivida, Inc.
Verified email at agrivida.com
Title
Cited by
Cited by
Year
Salt bridges: geometrically specific, designable interactions
JE Donald, DW Kulp, WF DeGrado
Proteins: Structure, Function, and Bioinformatics 79 (3), 898-915, 2011
2262011
Functional analysis of the transmembrane domain in paramyxovirus F protein-mediated membrane fusion
MLZ Bissonnette, JE Donald, WF DeGrado, TS Jardetzky, RA Lamb
Journal of molecular biology 386 (1), 14-36, 2009
692009
Neutralizing epitopes in the membrane-proximal external region of HIV-1 gp41 are influenced by the transmembrane domain and the plasma membrane
M Montero, N Gulzar, KA Klaric, JE Donald, C Lepik, S Wu, S Tsai, ...
Journal of virology 86 (6), 2930-2941, 2012
682012
Energetics of protein–DNA interactions
JE Donald, WW Chen, EI Shakhnovich
Nucleic acids research 35 (4), 1039-1047, 2007
682007
Transmembrane orientation and possible role of the fusogenic peptide from parainfluenza virus 5 (PIV5) in promoting fusion
JE Donald, Y Zhang, G Fiorin, V Carnevale, DR Slochower, F Gai, ...
Proceedings of the National Academy of Sciences 108 (10), 3958-3963, 2011
662011
Capture and imaging of a prehairpin fusion intermediate of the paramyxovirus PIV5
YH Kim, JE Donald, G Grigoryan, GP Leser, AY Fadeev, RA Lamb, ...
Proceedings of the National Academy of Sciences 108 (52), 20992-20997, 2011
632011
Trusted operating system
C Dalton, T Choo, A Norman
US Patent App. 10/240,137, 2003
632003
Knowledge-based potential for positioning membrane-associated structures and assessing residue-specific energetic contributions
CA Schramm, BT Hannigan, JE Donald, C Keasar, JG Saven, ...
Structure 20 (5), 924-935, 2012
612012
Mutation in the Fe–S scaffold protein Isu bypasses frataxin deletion
H Yoon, R Golla, E Lesuisse, J Pain, JE Donald, ER Lyver, D Pain, ...
Biochemical Journal 441 (1), 473-480, 2012
442012
Predicting specificity-determining residues in two large eukaryotic transcription factor families
JE Donald, EI Shakhnovich
Nucleic acids research 33 (14), 4455-4465, 2005
382005
Structural informatics, modeling, and design with an open‐source Molecular Software Library (MSL)
DW Kulp, S Subramaniam, JE Donald, BT Hannigan, BK Mueller, ...
Journal of computational chemistry 33 (20), 1645-1661, 2012
282012
Determining functional specificity from protein sequences
JE Donald, EI Shakhnovich
Bioinformatics 21 (11), 2629-2635, 2005
242005
SDR: a database of predicted specificity-determining residues in proteins
JE Donald, EI Shakhnovich
Nucleic acids research 37 (suppl_1), D191-D194, 2009
222009
Identification of interacting hot spots in the β3 integrin stalk using comprehensive interface design
JE Donald, H Zhu, RI Litvinov, WF DeGrado, JS Bennett
Journal of Biological Chemistry 285 (49), 38658-38665, 2010
172010
CoC: a database of universally conserved residues in protein folds
JE Donald, IA Hubner, VM Rotemberg, EI Shakhnovich, LA Mirny
Bioinformatics 21 (10), 2539-2540, 2005
112005
The oxygen tension in the placental bloods of goats
H Prystowsky, G Meschia, DH Barron
The Yale journal of biology and medicine 32 (6), 441, 1960
61960
Promotion of the neutralization-competent structure of the HIV-1 gp41 membrane proximal external region when tethered to its native transmembrane domain, and expressed in the …
N Gulzar, M Montero, KA Klaric, J Donald, S Wang, C Lepik, S Tsai, S Wu, ...
The Journal of Immunology 186 (1 Supplement), 53.24-53.24, 2011
12011
Multiprotein expression cassettes
B Shen, J Donald, RM Raab
US Patent 9,963,707, 2018
2018
TUPDE0203: Evaluation of the use of dried blood spots for viral load monitoring in resource‐limited settings in Zimbabwe
D Sargeant, S Deverasetty, Y Luo, A Villahoz‐Baleta, S Zobrist, ...
Journal of the International AIDS Society 15, 18438, 2012
2012
TUPDA0103: Novel DNA vaccine candidates that mimic the neutralization‐competent structure of the MPER of HIV‐1 gp41
N Gulzar, M Montero, KA Klaric, C Lepik, J Donald, S Tsai, S Wu, S Wang, ...
Journal of the International Aids Society 15, 2012
2012
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Articles 1–20