Erik Kristiansson
Erik Kristiansson
Verified email at chalmers.se
TitleCited byYear
Intraspecific ITS Variability in the Kingdom Fungi as Expressed in the International Sequence Databases and Its Implications for Molecular Species Identification
RH Nilsson, E Kristiansson, M Ryberg, N Hallenberg, KH Larsson
Evolutionary bioinformatics 4, EBO. S653, 2008
7402008
Taxonomic reliability of DNA sequences in public sequence databases: a fungal perspective
RH Nilsson, M Ryberg, E Kristiansson, K Abarenkov, KH Larsson, ...
PloS one 1 (1), e59, 2006
5182006
Improved software detection and extraction of ITS1 and ITS 2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data
J Bengtsson‐Palme, M Ryberg, M Hartmann, S Branco, Z Wang, A Godhe, ...
Methods in ecology and evolution 4 (10), 914-919, 2013
4452013
Pyrosequencing of antibiotic-contaminated river sediments reveals high levels of resistance and gene transfer elements
E Kristiansson, J Fick, A Janzon, R Grabic, C Rutgersson, B Weijdegård, ...
PloS one 6 (2), e17038, 2011
4072011
Evolutionary conservation of human drug targets in organisms used for environmental risk assessments
L Gunnarsson, A Jauhiainen, E Kristiansson, O Nerman, DGJ Larsson
Environmental science & technology 42 (15), 5807-5813, 2008
4012008
The ITS region as a target for characterization of fungal communities using emerging sequencing technologies
RH Nilsson, M Ryberg, K Abarenkov, E Sjökvist, E Kristiansson
FEMS Microbiology Letters 296 (1), 97-101, 2009
2292009
Co-occurrence of resistance genes to antibiotics, biocides and metals reveals novel insights into their co-selection potential
C Pal, J Bengtsson-Palme, E Kristiansson, DGJ Larsson
BMC genomics 16 (1), 964, 2015
2182015
Shotgun metagenomics reveals a wide array of antibiotic resistance genes and mobile elements in a polluted lake in India
J Bengtsson-Palme, F Boulund, J Fick, E Kristiansson, DG Larsson
Frontiers in microbiology 5, 648, 2014
1762014
An open source software package for automated extraction of ITS1 and ITS2 from fungal ITS sequences for use in high-throughput community assays and molecular ecology
RH Nilsson, V Veldre, M Hartmann, M Unterseher, A Amend, J Bergsten, ...
fungal ecology 3 (4), 284-287, 2010
1732010
BacMet: antibacterial biocide and metal resistance genes database
C Pal, J Bengtsson-Palme, C Rensing, E Kristiansson, DGJ Larsson
Nucleic acids research 42 (D1), D737-D743, 2013
1702013
The structure and diversity of human, animal and environmental resistomes
C Pal, J Bengtsson-Palme, E Kristiansson, DGJ Larsson
Microbiome 4 (1), 54, 2016
1562016
Environmental factors influencing the development and spread of antibiotic resistance
J Bengtsson-Palme, E Kristiansson, DGJ Larsson
FEMS microbiology reviews 42 (1), fux053, 2017
1432017
ShotgunFunctionalizeR: an R-package for functional comparison of metagenomes
E Kristiansson, P Hugenholtz, D Dalevi
Bioinformatics 25 (20), 2737-2738, 2009
1392009
A comprehensive, automatically updated fungal ITS sequence dataset for reference-based chimera control in environmental sequencing efforts
RH Nilsson, L Tedersoo, M Ryberg, E Kristiansson, M Hartmann, ...
Microbes and Environments, ME14121, 2015
1222015
The human gut microbiome as a transporter of antibiotic resistance genes between continents
J Bengtsson-Palme, M Angelin, M Huss, S Kjellqvist, E Kristiansson, ...
Antimicrobial agents and chemotherapy 59 (10), 6551-6560, 2015
1202015
Mining metadata from unidentified ITS sequences in GenBank: a case study in Inocybe (Basidiomycota)
M Ryberg, RH Nilsson, E Kristiansson, M Töpel, S Jacobsson, E Larsson
BMC Evolutionary Biology 8 (1), 50, 2008
1162008
An outlook on the fungal internal transcribed spacer sequences in GenBank and the introduction of a web‐based tool for the exploration of fungal diversity
M Ryberg, E Kristiansson, E Sjökvist, RH Nilsson
New Phytologist 181 (2), 471-477, 2009
1132009
Five simple guidelines for establishing basic authenticity and reliability of newly generated fungal ITS sequences
RH Nilsson, L Tedersoo, K Abarenkov, M Ryberg, E Kristiansson, ...
MycoKeys 4, 37, 2012
1042012
Elucidating selection processes for antibiotic resistance in sewage treatment plants using metagenomics
J Bengtsson-Palme, R Hammarén, C Pal, M Östman, B Björlenius, ...
Science of the Total Environment 572, 697-712, 2016
1032016
Quantitative transcriptome, proteome, and sulfur metabolite profiling of the Saccharomyces cerevisiae response to arsenite
M Thorsen, G Lagniel, E Kristiansson, C Junot, O Nerman, J Labarre, ...
Physiological genomics 30 (1), 35-43, 2007
1032007
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Articles 1–20