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Daniel P. Cetnar
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Precise quantification of translation inhibition by mRNA structures that overlap with the ribosomal footprint in N-terminal coding sequences
A Espah Borujeni, D Cetnar, I Farasat, A Smith, N Lundgren, HM Salis
Nucleic acids research 45 (9), 5437-5448, 2017
1452017
Simultaneous repression of multiple bacterial genes using nonrepetitive extra-long sgRNA arrays
AC Reis, SM Halper, GE Vezeau, DP Cetnar, A Hossain, PR Clauer, ...
Nature biotechnology 37 (11), 1294-1301, 2019
1282019
Automated design of thousands of nonrepetitive parts for engineering stable genetic systems
A Hossain, E Lopez, SM Halper, DP Cetnar, AC Reis, D Strickland, ...
Nature biotechnology 38 (12), 1466-1475, 2020
952020
Systematic Quantification of Sequence and Structural Determinants Controlling mRNA stability in Bacterial Operons
DP Cetnar, HM Salis
ACS Synthetic Biology 10 (2), 318-332, 2021
592021
Thermodynamics of the Electron Acceptors in Heliobacterium modesticaldum: An Exemplar of an Early Homodimeric Type I Photosynthetic Reaction Center
B Ferlez, J Cowgill, W Dong, C Gisriel, S Lin, M Flores, K Walters, ...
Biochemistry 55 (16), 2358-2370, 2016
272016
An automated pipeline for engineering many-enzyme pathways: computational sequence design, pathway expression-flux mapping, and scalable pathway optimization
SM Halper, DP Cetnar, HM Salis
Synthetic Metabolic Pathways: Methods and Protocols, 39-61, 2018
92018
Surrogate model to screen for inactivation‐based clearance of enveloped viruses during biotherapeutics process development
H Feroz, D Cetnar, R Hewlett, S Sharma, M Holstein, S Ghose, ZJ Li
Biotechnology Journal 16 (12), 2100176, 2021
52021
Systematic Quantification of Sequence and Structural Determinants Controlling mRNA stability in Bacterial Operons. ACS Synthetic Biology 10 (2): 318–332
DP Cetnar, HM Salis
52021
Engineered CRISPR/Cas9 Systems for Simultaneous Long-term Regulation of Multiple Targets
H Salis, A Reis, S Halper, P Clauer, GE Vezeau, DP Cetnar, A Hossain
US Patent App. 17/633,321, 2022
2022
Machine Learning-Evolved Biophysical Models for Engineering Genetic Circuits and Pathways
HM Salis, TL LaFleur, A Hossain, AC Reis, SM Halper, GE Vezeau, ...
2022
Predicting Gene Expression For Robust Genetic System Design
D Cetnar
Pennsylvania State University, 2021
2021
Establishing a surrogate model for inactivation of enveloped viruses to screen viral clearance conditions during biotherapeutics process development
H Feroz, D Cetnar, R Hewlett, S Sharma, M Holstein, S Ghose, ZJ Li
2021
Predicting Coupled Expression Dynamics in Bacterial Operons
D Cetnar, X Tang, HM Salis
2018 AIChE Annual Meeting, 2018
2018
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Artiklar 1–13