|Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse|
L Orlando, A Ginolhac, G Zhang, D Froese, A Albrechtsen, M Stiller, ...
Nature 499 (7456), 74-78, 2013
|Genomic evidence for island population conversion resolves conflicting theories of polar bear evolution|
JA Cahill, RE Green, TL Fulton, M Stiller, F Jay, N Ovsyanikov, ...
PLoS genetics 9 (3), 2013
|Genome-wide evidence reveals that African and Eurasian golden jackals are distinct species|
KP Koepfli, J Pollinger, R Godinho, J Robinson, A Lea, S Hendricks, ...
Current Biology 25 (16), 2158-2165, 2015
|Whole-genome sequence analysis shows that two endemic species of North American wolf are admixtures of the coyote and gray wolf|
JA Cahill, Z Fan, I Gronau, J Robinson, JP Pollinger, B Shapiro, J Wall, ...
Science Advances 2 (7), e1501714, 2016
|Genomic evidence of geographically widespread effect of gene flow from polar bears into brown bears|
JA Cahill, I Stirling, L Kistler, R Salamzade, E Ersmark, TL Fulton, M Stiller, ...
Molecular ecology 24 (6), 1205-1217, 2015
|Natural selection shaped the rise and fall of passenger pigeon genomic diversity|
GGR Murray, AER Soares, BJ Novak, NK Schaefer, JA Cahill, AJ Baker, ...
Science 358 (6365), 951-954, 2017
|Genomic Data from Extinct North American Camelops Revise Camel Evolutionary History|
PD Heintzman, GD Zazula, JA Cahill, AV Reyes, RDE MacPhee, ...
Molecular Biology and Evolution 32 (9), 2433-2440, 2015
|Specification, annotation, visualization and simulation of a large rule-based model for ERBB receptor signaling|
MS Creamer, EC Stites, M Aziz, JA Cahill, CW Tan, ME Berens, H Han, ...
BMC systems biology 6 (1), 107, 2012
|Survival and divergence in a small group: The extraordinary genomic history of the endangered Apennine brown bear stragglers|
A Benazzo, E Trucchi, JA Cahill, PM Delser, S Mona, M Fumagalli, ...
Proceedings of the National Academy of Sciences 114 (45), E9589-E9597, 2017
|Partial genomic survival of cave bears in living brown bears|
A Barlow, JA Cahill, S Hartmann, C Theunert, G Xenikoudakis, GG Fortes, ...
Nature ecology & evolution 2 (10), 1563-1570, 2018
|Complex admixture preceded and followed the extinction of wisent in the wild|
K Węcek, S Hartmann, JLA Paijmans, U Taron, G Xenikoudakis, JA Cahill, ...
Molecular biology and evolution 34 (3), 598-612, 2017
|A new genus of horse from Pleistocene North America|
PD Heintzman, GD Zazula, RDE MacPhee, E Scott, JA Cahill, ...
Elife 6, e29944, 2017
|Inferring species divergence times using pairwise sequential Markovian coalescent modelling and low-coverage genomic data|
JA Cahill, AER Soares, RE Green, B Shapiro
Philosophical Transactions of the Royal Society B: Biological Sciences 371 …, 2016
|Genomic evidence of widespread admixture from polar bears into brown bears during the last ice age|
JA Cahill, PD Heintzman, K Harris, MD Teasdale, J Kapp, AER Soares, ...
Molecular biology and evolution 35 (5), 1120-1129, 2018
|Response to Hohenlohe et al.|
BM Vonholdt, JA Cahill, I Gronau, B Shapiro, J Wall, RK Wayne
Science Advances, 2017
|Hybridization in human evolution: insights from other organisms|
RR Ackermann, ML Arnold, MD Baiz, JA Cahill, L Cortés‐Ortiz, BJ Evans, ...
Evolutionary Anthropology: Issues, News, and Reviews 28 (4), 189-209, 2019
|Puma genomes from North and South America provide insights into the genomic consequences of inbreeding|
NF Saremi, MA Supple, A Byrne, JA Cahill, LL Coutinho, L Dalén, ...
Nature communications 10 (1), 1-10, 2019
|Social group signatures in hummingbird displays provide evidence of co-occurrence of vocal and visual learning|
M Araya-Salas, G Smith-Vidaurre, DJ Mennill, PL González-Gómez, ...
Proceedings of the Royal Society B 286 (1903), 20190666, 2019
|The evolution of the small and isolated population of Apennine brown bears (Ursus arctos marsicanus): a whole-genomes perspective|
A Benazzo, L Boitani, J Cahill, P Ciucci, L Cornetti, M Fumagalli, S Fuselli, ...
Evoluzione 2015: 6th Congress of the Italian Society for Evolutionary …, 2015
|Mountain lion genomes provide insights into genetic rescue of inbred populations|
NF Saremi, MA Supple, A Byrne, JA Cahill, LL Coutinho, L Dalen, ...
bioRxiv, 482315, 2018