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Folker Meyer
Folker Meyer
University of Duisburg-Essen; University Hospital Essen
Verified email at uni-due.de
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Year
The RAST Server: rapid annotations using subsystems technology
RK Aziz, D Bartels, AA Best, M DeJongh, T Disz, RA Edwards, K Formsma, ...
BMC genomics 9, 1-15, 2008
115632008
The metagenomics RAST server–a public resource for the automatic phylogenetic and functional analysis of metagenomes
F Meyer, D Paarmann, M D'Souza, R Olson, EM Glass, M Kubal, ...
BMC bioinformatics 9, 1-8, 2008
39862008
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes
R Overbeek, T Begley, RM Butler, JV Choudhuri, HY Chuang, M Cohoon, ...
Nucleic acids research 33 (17), 5691-5702, 2005
22662005
A communal catalogue reveals Earth’s multiscale microbial diversity
LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ...
Nature 551 (7681), 457-463, 2017
21712017
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
RM Bowers, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ...
Nature Biotechnology 35 (8), 2017
14492017
Metagenomics-a guide from sampling to data analysis
T Thomas, J Gilbert, F Meyer
Microbial informatics and experimentation 2, 1-12, 2012
11882012
The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of l-aspartate-derived amino acids and vitamins
J Kalinowski, B Bathe, D Bartels, N Bischoff, M Bott, A Burkovski, N Dusch, ...
Journal of Biotechnology 104 (1), 5-25, 2003
11132003
Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE
modENCODE Consortium, S Roy, J Ernst, PV Kharchenko, P Kheradpour, ...
Science 330 (6012), 1787-1797, 2010
10702010
KBase: the United States department of energy systems biology knowledgebase
AP Arkin, RW Cottingham, CS Henry, NL Harris, RL Stevens, S Maslov, ...
Nature biotechnology 36 (7), 566-569, 2018
10092018
GenDB—an open source genome annotation system for prokaryote genomes
F Meyer, A Goesmann, AC McHardy, D Bartels, T Bekel, J Clausen, ...
Nucleic acids research 31 (8), 2187-2195, 2003
8342003
The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome.
D McDonald, JC Clemente, J Kuczynski, J Rideout, J Stombaugh, ...
Gigascience, 2012
7832012
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications
P Yilmaz, R Kottmann, D Field, R Knight, JR Cole, L Amaral-Zettler, ...
Nature biotechnology 29 (5), 415-420, 2011
7072011
Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis
S Schneiker, VAPM dos Santos, D Bartels, T Bekel, M Brecht, ...
Nature biotechnology 24 (8), 997-1004, 2006
4952006
Complete genome sequence of the myxobacterium Sorangium cellulosum
S Schneiker, O Perlova, O Kaiser, K Gerth, A Alici, MO Altmeyer, D Bartels, ...
Nature biotechnology 25 (11), 1281-1289, 2007
4772007
MG-RAST, a metagenomics service for analysis of microbial community structure and function
KP Keegan, EM Glass, F Meyer
Microbial environmental genomics (MEG), 207-233, 2016
4752016
A predator unmasked: life cycle of Bdellovibrio bacteriovorus from a genomic perspective
S Rendulic, P Jagtap, A Rosinus, M Eppinger, C Baar, C Lanz, H Keller, ...
Science 303 (5658), 689-692, 2004
4452004
Insights into Genome Plasticity and Pathogenicity of the Plant Pathogenic Bacterium Xanthomonas campestris pv. vesicatoria Revealed by the Complete Genome …
F Thieme, R Koebnik, T Bekel, C Berger, J Boch, D Büttner, C Caldana, ...
Journal of bacteriology 187 (21), 7254-7266, 2005
4262005
Whole genome analysis of the marine BacteroidetesGramella forsetii’ reveals adaptations to degradation of polymeric organic matter
M Bauer, M Kube, H Teeling, M Richter, T Lombardot, E Allers, ...
Environmental Microbiology 8 (12), 2201-2213, 2006
3952006
Using the metagenomics RAST server (MG-RAST) for analyzing shotgun metagenomes
EM Glass, J Wilkening, A Wilke, D Antonopoulos, F Meyer
Cold Spring Harbor Protocols 2010 (1), pdb. prot5368, 2010
3662010
Rose: generating sequence families.
J Stoye, D Evers, F Meyer
Bioinformatics (Oxford, England) 14 (2), 157-163, 1998
3421998
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