ARGs-OAP v2. 0 with an expanded SARG database and Hidden Markov Models for enhancement characterization and quantification of antibiotic resistance genes in environmental … X Yin, XT Jiang, B Chai, L Li, Y Yang, JR Cole, JM Tiedje, T Zhang Bioinformatics 34 (13), 2263-2270, 2018 | 421 | 2018 |
Illumina sequencing of 16S rRNA tag revealed spatial variations of bacterial communities in a mangrove wetland XT Jiang, X Peng, GH Deng, HF Sheng, Y Wang, HW Zhou, NFY Tam Microbial ecology 66, 96-104, 2013 | 395 | 2013 |
ARGs-OAP: online analysis pipeline for antibiotic resistance genes detection from metagenomic data using an integrated structured ARG-database Y Yang, X Jiang, B Chai, L Ma, B Li, A Zhang, JR Cole, JM Tiedje, ... Bioinformatics 32 (15), 2346-2351, 2016 | 273 | 2016 |
Gut microbiota impact on the peripheral immune response in non-alcoholic fatty liver disease related hepatocellular carcinoma J Behary, N Amorim, XT Jiang, A Raposo, L Gong, E McGovern, R Ibrahim, ... Nature Communications 12 (1), 1-14, 2021 | 234 | 2021 |
Antibiotic-mediated changes in the fecal microbiome of broiler chickens define the incidence of antibiotic resistance genes W Xiong, Y Wang, Y Sun, L Ma, Q Zeng, X Jiang, A Li, Z Zeng, T Zhang Microbiome 6, 1-11, 2018 | 226 | 2018 |
Integrated biogeography of planktonic and sedimentary bacterial communities in the Yangtze River T Liu, AN Zhang, J Wang, S Liu, X Jiang, C Dang, T Ma, S Liu, Q Chen, ... Microbiome 6, 1-14, 2018 | 220 | 2018 |
Catalogue of antibiotic resistome and host-tracking in drinking water deciphered by a large scale survey L Ma, B Li, XT Jiang, YL Wang, Y Xia, AD Li, T Zhang Microbiome 5, 1-12, 2017 | 210 | 2017 |
BIPES, a cost-effective high-throughput method for assessing microbial diversity HW Zhou, DF Li, NFY Tam, XT Jiang, H Zhang, HF Sheng, J Qin, X Liu, ... The ISME journal 5 (4), 741-749, 2011 | 206 | 2011 |
Comammox in drinking water systems Y Wang, L Ma, Y Mao, X Jiang, Y Xia, K Yu, B Li, T Zhang Water research 116, 332-341, 2017 | 194 | 2017 |
Stability of operational taxonomic units: an important but neglected property for analyzing microbial diversity Y He, JG Caporaso, XT Jiang, HF Sheng, SM Huse, JR Rideout, ... Microbiome 3, 1-10, 2015 | 185 | 2015 |
Antibiotic resistome in a large‐scale healthy human gut microbiota deciphered by metagenomic and network analyses J Feng, B Li, X Jiang, Y Yang, GF Wells, T Zhang, X Li Environmental microbiology 20 (1), 355-368, 2018 | 159 | 2018 |
Effects of polymerase, template dilution and cycle number on PCR based 16 S rRNA diversity analysis using the deep sequencing method JY Wu, XT Jiang, YX Jiang, SY Lu, F Zou, HW Zhou BMC microbiology 10, 1-7, 2010 | 153 | 2010 |
Comparison of microbial diversity determined with the same variable tag sequence extracted from two different PCR amplicons Y He, BJ Zhou, GH Deng, XT Jiang, H Zhang, HW Zhou BMC microbiology 13, 1-8, 2013 | 73 | 2013 |
Metagenomic and resistome analysis of a full-scale municipal wastewater treatment plant in Singapore containing membrane bioreactors C Ng, B Tan, XT Jiang, X Gu, H Chen, BW Schmitz, L Haller, FR Charles, ... Frontiers in microbiology 10, 172, 2019 | 69 | 2019 |
Evaluation of a hybrid approach using UBLAST and BLASTX for metagenomic sequences annotation of specific functional genes Y Yang, XT Jiang, T Zhang PLoS One 9 (10), e110947, 2014 | 57 | 2014 |
MinION nanopore sequencing enables correlation between resistome phenotype and genotype of coliform bacteria in municipal sewage Y Xia, AD Li, Y Deng, XT Jiang, LG Li, T Zhang Frontiers in microbiology 8, 2105, 2017 | 56 | 2017 |
Population dynamics of bulking and foaming bacteria in a full-scale wastewater treatment plant over five years XT Jiang, F Guo, T Zhang Scientific reports 6 (1), 24180, 2016 | 44 | 2016 |
Successional dynamics and alternative stable states in a saline activated sludge microbial community over 9 years Y Wang, J Ye, F Ju, L Liu, JA Boyd, Y Deng, DH Parks, X Jiang, X Yin, ... Microbiome 9, 1-15, 2021 | 43 | 2021 |
High-resolution temporal and spatial patterns of virome in wastewater treatment systems Y Wang, X Jiang, L Liu, B Li, T Zhang Environmental science & technology 52 (18), 10337-10346, 2018 | 41 | 2018 |
Toward an intensive longitudinal understanding of activated sludge bacterial assembly and dynamics XT Jiang, L Ye, F Ju, YL Wang, T Zhang Environmental science & technology 52 (15), 8224-8232, 2018 | 39 | 2018 |