| Full-length transcriptome assembly from RNA-Seq data without a reference genome MG Grabherr, BJ Haas, M Yassour, JZ Levin, DA Thompson, I Amit, ... Nature biotechnology 29 (7), 644-652, 2011 | 15350 | 2011 |
| De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis BJ Haas, A Papanicolaou, M Yassour, M Grabherr, PD Blood, J Bowden, ... Nature protocols 8 (8), 1494-1512, 2013 | 6894 | 2013 |
| Genome sequence, comparative analysis and haplotype structure of the domestic dog K Lindblad-Toh, CM Wade, TS Mikkelsen, EK Karlsson, DB Jaffe, ... Nature 438 (7069), 803-819, 2005 | 2931 | 2005 |
| Evolution of genes and genomes on the Drosophila phylogeny AG Clark, L Pachter Nature 450 (7167), 203-218, 2007 | 2182 | 2007 |
| Trinity: reconstructing a full-length transcriptome without a genome from RNA-Seq data MG Grabherr, BJ Haas, M Yassour, JZ Levin, DA Thompson, I Amit, ... Nature biotechnology 29 (7), 644, 2011 | 1803 | 2011 |
| The genomic basis of adaptive evolution in threespine sticklebacks FC Jones, MG Grabherr, YF Chan, P Russell, E Mauceli, J Johnson, ... Nature 484 (7392), 55-61, 2012 | 1702 | 2012 |
| Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium LJ Ma, HC Van Der Does, KA Borkovich, JJ Coleman, MJ Daboussi, ... Nature 464 (7287), 367-373, 2010 | 1571 | 2010 |
| Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans BJ Haas, S Kamoun, MC Zody, RHY Jiang, RE Handsaker, LM Cano, ... Nature 461 (7262), 393-398, 2009 | 1563 | 2009 |
| Genome Sequence of Aedes aegypti, a Major Arbovirus Vector V Nene, JR Wortman, D Lawson, B Haas, C Kodira, Z Tu, B Loftus, Z Xi, ... Science 316 (5832), 1718-1723, 2007 | 1274 | 2007 |
| Computational methods for transcriptome annotation and quantification using RNA-seq M Garber, MG Grabherr, M Guttman, C Trapnell Nature methods 8 (6), 469-477, 2011 | 1218 | 2011 |
| Evolution of pathogenicity and sexual reproduction in eight Candida genomes G Butler, MD Rasmussen, MF Lin, MAS Santos, S Sakthikumar, CA Munro, ... Nature 459 (7247), 657-662, 2009 | 1110 | 2009 |
| Evolution of Darwin’s finches and their beaks revealed by genome sequencing S Lamichhaney, J Berglund, MS Almén, K Maqbool, M Grabherr, ... Nature 518 (7539), 371-375, 2015 | 816 | 2015 |
| Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences TS Mikkelsen, MJ Wakefield, B Aken, CT Amemiya, JL Chang, S Duke, ... Nature 447 (7141), 167-177, 2007 | 754 | 2007 |
| Obligate biotrophy features unraveled by the genomic analysis of rust fungi S Duplessis, CA Cuomo, YC Lin, A Aerts, E Tisserant, C Veneault-Fourrey, ... Proceedings of the National Academy of Sciences 108 (22), 9166-9171, 2011 | 725 | 2011 |
| The genome of the green anole lizard and a comparative analysis with birds and mammals J Alföldi, F Di Palma, M Grabherr, C Williams, L Kong, E Mauceli, ... Nature 477 (7366), 587-591, 2011 | 651 | 2011 |
| The genomic landscape underlying phenotypic integrity in the face of gene flow in crows JW Poelstra, N Vijay, CM Bossu, H Lantz, B Ryll, I Müller, V Baglione, ... Science 344 (6190), 1410-1414, 2014 | 552 | 2014 |
| Genomic Analysis of the Basal Lineage Fungus Rhizopus oryzae Reveals a Whole-Genome Duplication LJ Ma, AS Ibrahim, C Skory, MG Grabherr, G Burger, M Butler, M Elias, ... PLoS genetics 5 (7), e1000549, 2009 | 390 | 2009 |
| A cis-acting regulatory mutation causes premature hair graying and susceptibility to melanoma in the horse G Rosengren Pielberg, A Golovko, E Sundström, I Curik, J Lennartsson, ... Nature genetics 40 (8), 1004-1009, 2008 | 347 | 2008 |
| Population-scale sequencing reveals genetic differentiation due to local adaptation in Atlantic herring S Lamichhaney, AM Barrio, N Rafati, G Sundström, CJ Rubin, ER Gilbert, ... Proceedings of the National Academy of Sciences 109 (47), 19345-19350, 2012 | 279 | 2012 |
| Genome-wide synteny through highly sensitive sequence alignment: Satsuma MG Grabherr, P Russell, M Meyer, E Mauceli, J Alföldi, F Di Palma, ... Bioinformatics 26 (9), 1145-1151, 2010 | 238 | 2010 |
Brian HaasBroad InstituteVerified email at broadinstitute.org
