| Insights from 20 years of bacterial genome sequencing M Land, L Hauser, SR Jun, I Nookaew, MR Leuze, TH Ahn, T Karpinets, ... Functional & integrative genomics 15, 141-161, 2015 | 921 | 2015 |
| Alignment-free genome comparison with feature frequency profiles (FFP) and optimal resolutions GE Sims, SR Jun, GA Wu, SH Kim Proceedings of the National Academy of Sciences 106 (8), 2677-2682, 2009 | 493 | 2009 |
| Whole-proteome phylogeny of prokaryotes by feature frequency profiles: An alignment-free method with optimal feature resolution SR Jun, GE Sims, GA Wu, SH Kim Proceedings of the National Academy of Sciences 107 (1), 133-138, 2010 | 173 | 2010 |
| Global mapping of the protein structure space and application in structure-based inference of protein function J Hou, SR Jun, C Zhang, SH Kim Proceedings of the National Academy of Sciences 102 (10), 3651-3656, 2005 | 144 | 2005 |
| Global genomic epidemiology of Salmonella enterica serovar Typhimurium DT104 P Leekitcharoenphon, RS Hendriksen, S Le Hello, FX Weill, ... Applied and environmental microbiology 82 (8), 2516-2526, 2016 | 140 | 2016 |
| Whole-genome phylogeny of mammals: evolutionary information in genic and nongenic regions GE Sims, SR Jun, GA Wu, SH Kim Proceedings of the National Academy of Sciences 106 (40), 17077-17082, 2009 | 94 | 2009 |
| Whole-proteome phylogeny of large dsDNA virus families by an alignment-free method GA Wu, SR Jun, GE Sims, SH Kim Proceedings of the National Academy of Sciences 106 (31), 12826-12831, 2009 | 94 | 2009 |
| Abiotic Stresses Shift Belowground Populus-Associated Bacteria Toward a Core Stress Microbiome CM Timm, KR Carter, AA Carrell, SR Jun, SS Jawdy, JM Vélez, LE Gunter, ... MSystems 3 (1), 10.1128/msystems. 00070-17, 2018 | 92 | 2018 |
| Sulforaphane prevents age‐associated cardiac and muscular dysfunction through Nrf2 signaling C Bose, I Alves, P Singh, PT Palade, E Carvalho, E Břrsheim, SR Jun, ... Aging Cell 19 (11), e13261, 2020 | 88 | 2020 |
| Diversity of Pseudomonas genomes, including Populus-associated isolates, as revealed by comparative genome analysis SR Jun, TM Wassenaar, I Nookaew, L Hauser, V Wanchai, M Land, ... Applied and Environmental Microbiology 82 (1), 375-383, 2016 | 88 | 2016 |
| Case of microcephaly after congenital infection with Asian lineage Zika virus, Thailand T Wongsurawat, N Athipanyasilp, P Jenjaroenpun, SR Jun, B Kaewnapan, ... Emerging infectious diseases 24 (9), 1758, 2018 | 83 | 2018 |
| Metabolic functions of Pseudomonas fluorescens strains from Populus deltoides depend on rhizosphere or endosphere isolation compartment CM Timm, AG Campbell, SM Utturkar, SR Jun, RE Parales, WA Tan, ... Frontiers in microbiology 6, 1118, 2015 | 73 | 2015 |
| Ebolavirus comparative genomics SR Jun, MR Leuze, I Nookaew, EC Uberbacher, M Land, Q Zhang, ... FEMS microbiology reviews 39 (5), 764-778, 2015 | 69 | 2015 |
| Viral Phylogenomics Using an Alignment-Free Method: A Three-Step Approach to Determine Optimal Length of k-mer Q Zhang, SR Jun, M Leuze, D Ussery, I Nookaew Scientific reports 7 (1), 40712, 2017 | 64 | 2017 |
| PanFP: pangenome-based functional profiles for microbial communities SR Jun, MS Robeson, LJ Hauser, CW Schadt, AA Gorin BMC research notes 8, 1-7, 2015 | 64 | 2015 |
| Quality scores for 32,000 genomes ML Land, D Hyatt, SR Jun, GH Kora, LJ Hauser, O Lukjancenko, ... Standards in genomic sciences 9, 1-10, 2014 | 54 | 2014 |
| Sample storage conditions induce post-collection biases in microbiome profiles SV Jenkins, KB Vang, A Gies, RJ Griffin, SR Jun, I Nookaew, RPM Dings BMC microbiology 18, 1-9, 2018 | 36 | 2018 |
| Suggested mechanisms for Zika virus causing microcephaly: what do the genomes tell us? SR Jun, TM Wassenaar, V Wanchai, P Patumcharoenpol, I Nookaew, ... Bmc Bioinformatics 18, 81-92, 2017 | 23 | 2017 |
| KITSUNE: A tool for identifying empirically optimal K-mer length for alignment-free phylogenomic analysis N Pornputtapong, DA Acheampong, P Patumcharoenpol, P Jenjaroenpun, ... Frontiers in bioengineering and biotechnology 8, 556413, 2020 | 20 | 2020 |
| Multi-omic analysis reveals different effects of sulforaphane on the microbiome and metabolome in old compared to young mice SR Jun, A Cheema, C Bose, M Boerma, PT Palade, E Carvalho, ... Microorganisms 8 (10), 1500, 2020 | 19 | 2020 |
Miriam LandResearcher, Oak Ridge National LaboratoryVerified email at ornl.gov
