Charles Blatti
Charles Blatti
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Cited by
Cited by
The genome of a songbird
WC Warren, DF Clayton, H Ellegren, AP Arnold, LDW Hillier, A Künstner, ...
Nature 464 (7289), 757-762, 2010
Genomic signatures of evolutionary transitions from solitary to group living
KM Kapheim, H Pan, C Li, SL Salzberg, D Puiu, T Magoc, HM Robertson, ...
Science 348 (6239), 1139-1143, 2015
Thermodynamics-based models of transcriptional regulation by enhancers: the roles of synergistic activation, cooperative binding and short-range repression
X He, MAH Samee, C Blatti, S Sinha
PLoS computational biology 6 (9), e1000935, 2010
Lung epithelial and endothelial damage, loss of tissue repair, inhibition of fibrinolysis, and cellular senescence in fatal COVID-19
F D’Agnillo, KA Walters, Y Xiao, ZM Sheng, K Scherler, J Park, S Gygli, ...
Science Translational Medicine 13 (620), eabj7790, 2021
Core and region-enriched networks of behaviorally regulated genes and the singing genome
O Whitney, AR Pfenning, JT Howard, CA Blatti, F Liu, JM Ward, R Wang, ...
Science 346 (6215), 1256780, 2014
The Transcription Factor Ultraspiracle Influences Honey Bee Social Behavior and Behavior-Related Gene Expression
SA Ament, Y Wang, CC Chen, CA Blatti, F Hong, ZS Liang, N Negre, ...
PLoS Genetics 8 (3), e1002596, 2012
Quantitative Analysis of the Drosophila Segmentation Regulatory Network Using Pattern Generating Potentials
M Kazemian, C Blatti, A Richards, M McCutchan, N Wakabayashi-Ito, ...
PLoS biology 8 (8), e1000456, 2010
Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants
MS Enuameh, Y Asriyan, A Richards, RG Christensen, VL Hall, ...
Genome research 23 (6), 928-940, 2013
Transcriptional regulation of brain gene expression in response to a territorial intrusion
YO Sanogo, M Band, C Blatti, S Sinha, AM Bell
Proceedings of the Royal Society B: Biological Sciences 279 (1749), 4929-4938, 2012
New meta-analysis tools reveal common transcriptional regulatory basis for multiple determinants of behavior
SA Ament, CA Blatti, C Alaux, MM Wheeler, AL Toth, Y Le Conte, GJ Hunt, ...
Proceedings of the National Academy of Sciences 109 (26), E1801-E1810, 2012
Computational identification of diverse mechanisms underlying transcription factor-DNA occupancy
Q Cheng, M Kazemian, H Pham, C Blatti, SE Celniker, SA Wolfe, ...
PLoS genetics 9 (8), e1003571, 2013
Characterizing gene sets using discriminative random walks with restart on heterogeneous biological networks
C Blatti, S Sinha
Bioinformatics 32 (14), 2167-2175, 2016
Integrating motif, DNA accessibility and gene expression data to build regulatory maps in an organism
C Blatti, M Kazemian, S Wolfe, M Brodsky, S Sinha
Nucleic acids research 43 (8), 3998-4012, 2015
Knowledge-guided analysis of" omics" data using the KnowEnG cloud platform
C Blatti III, A Emad, MJ Berry, L Gatzke, M Epstein, D Lanier, P Rizal, J Ge, ...
PLoS biology 18 (1), e3000583, 2020
Reptiles and mammals have differentially retained long conserved noncoding sequences from the amniote ancestor
DE Janes, C Chapus, Y Gondo, DF Clayton, S Sinha, CA Blatti, CL Organ, ...
Genome biology and evolution 3, 102-113, 2011
Cross‐species systems analysis of evolutionary toolkits of neurogenomic response to social challenge
MC Saul, C Blatti, W Yang, SA Bukhari, HY Shpigler, JM Troy, CH Seward, ...
Genes, Brain and Behavior 18 (1), e12502, 2019
Individual differences in honey bee behavior enabled by plasticity in brain gene regulatory networks
BM Jones, VD Rao, T Gernat, T Jagla, AC Cash-Ahmed, BER Rubin, ...
Elife 9, e62850, 2020
Draft Genome Assembly and Population Genetics of an Agricultural Pollinator, the Solitary Alkali Bee (Halictidae: Nomia melanderi)
KM Kapheim, H Pan, C Li, C Blatti III, BA Harpur, P Ioannidis, BM Jones, ...
G3: Genes, Genomes, Genetics 9 (3), 625-634, 2019
Motif enrichment tool
C Blatti, S Sinha
Nucleic acids research 42 (W1), W20-W25, 2014
Comparison of single and module-based methods for modeling gene regulatory networks
M Hernaez, C Blatti, O Gevaert
Bioinformatics 36 (2), 558-567, 2020
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