| The CRAPome: a contaminant repository for affinity purification–mass spectrometry data D Mellacheruvu, Z Wright, AL Couzens, JP Lambert, NA St-Denis, T Li, ... Nature methods 10 (8), 730-736, 2013 | 964 | 2013 |
| SAINT: probabilistic scoring of affinity purification–mass spectrometry data H Choi, B Larsen, ZY Lin, A Breitkreutz, D Mellacheruvu, D Fermin, ZS Qin, ... Nature methods 8 (1), 70-73, 2011 | 536 | 2011 |
| MSFragger: ultrafast and comprehensive peptide identification in mass spectrometry–based proteomics AT Kong, FV Leprevost, DM Avtonomov, D Mellacheruvu, AI Nesvizhskii Nature methods 14 (5), 513-520, 2017 | 244 | 2017 |
| Targeting the MLL complex in castration-resistant prostate cancer R Malik, AP Khan, IA Asangani, M Cieślik, JR Prensner, X Wang, MK Iyer, ... Nature medicine 21 (4), 344, 2015 | 123 | 2015 |
| Analyzing protein‐protein interactions from affinity purification‐mass spectrometry data with SAINT H Choi, G Liu, D Mellacheruvu, M Tyers, AC Gingras, AI Nesvizhskii Current protocols in bioinformatics 39 (1), 8.15. 1-8.15. 23, 2012 | 104 | 2012 |
| Genetic Networks Inducing Invasive Growth in Saccharomyces cerevisiae Identified Through Systematic Genome-Wide Overexpression CA Shively, MJ Eckwahl, CJ Dobry, D Mellacheruvu, A Nesvizhskii, ... Genetics 193 (4), 1297-1310, 2013 | 48 | 2013 |
| Functions of the COPII gene paralogs SEC23A and SEC23B are interchangeable in vivo R Khoriaty, GG Hesketh, A Bernard, AC Weyand, D Mellacheruvu, G Zhu, ... Proceedings of the National Academy of Sciences 115 (33), E7748-E7757, 2018 | 32 | 2018 |
| The yeast Sks1p kinase signaling network regulates pseudohyphal growth and glucose response C Johnson, HK Kweon, D Sheidy, CA Shively, D Mellacheruvu, ... PLoS Genet 10 (3), e1004183, 2014 | 31 | 2014 |
| Large-scale analysis of kinase signaling in yeast pseudohyphal development identifies regulation of ribonucleoprotein granules CA Shively, HK Kweon, KL Norman, D Mellacheruvu, T Xu, DT Sheidy, ... PLoS Genet 11 (10), e1005564, 2015 | 20 | 2015 |
| PAF1 complex interactions with SETDB1 mediate promoter H3K9 methylation and transcriptional repression of Hoxa9 and Meis1 in acute myeloid leukemia J Ropa, N Saha, Z Chen, J Serio, W Chen, D Mellacheruvu, L Zhao, ... Oncotarget 9 (31), 22123, 2018 | 15 | 2018 |
| HSC70 is a chaperone for wild-type and mutant cardiac myosin binding protein C AA Glazier, N Hafeez, D Mellacheruvu, V Basrur, AI Nesvizhskii, LM Lee, ... JCI insight 3 (11), 2018 | 13 | 2018 |
| Allele-specific RNA interference prevents neuropathy in Charcot-Marie-Tooth disease type 2D mouse models KH Morelli, LB Griffin, NK Pyne, LM Wallace, AM Fowler, SN Oprescu, ... The Journal of clinical investigation 129 (12), 5568-5583, 2019 | 12 | 2019 |
| Proteomic profiling of naïve multiple myeloma patient plasma cells identifies pathways associated with favourable response to bortezomib‐based treatment regimens D Dytfeld, S Rosebeck, M Kandarpa, A Mayampurath, D Mellacheruvu, ... British journal of haematology 170 (1), 66-79, 2015 | 10 | 2015 |
| Philosopher: a versatile toolkit for shotgun proteomics data analysis F da Veiga Leprevost, SE Haynes, DM Avtonomov, HY Chang, ... Nature methods 17 (9), 869-870, 2020 | 9 | 2020 |
| Proteomic profiling of multiple myeloma (mm) cells using itraq and label-free quantitative proteomics for the prediction of complete or near complete response (CR/nCR) in … D Dytfeld, M Kandarpa, JR Strahler, D Mellacheruvu, S Subramani, ... Blood, The Journal of the American Society of Hematology 116 (21), 618-618, 2010 | 3 | 2010 |
| Proteomic Profiling of Multiple Myeloma Using iTRAQ Labeling Followed by Multidimensional Liquid Chromatography and Tandem Mass Spectrometry. D Dytfeld, M Hari, J Strahler, D Mellacheruvu, S Subramani, A Nesvizhskii, ... Blood, The Journal of the American Society of Hematology 114 (22), 4865-4865, 2009 | 3 | 2009 |
| Kir2. 1 interactome mapping uncovers PKP4 as a modulator of the Kir2. 1-regulated inward rectifier potassium currents SS Park, D Ponce-Balbuena, R Kuick, G Guerrero-Serna, J Yoon, ... Molecular & Cellular Proteomics 19 (9), 1436-1449, 2020 | 2 | 2020 |
| Cardiac myosin binding protein c mutants interact with and cause mislocalization of the Hsp70 family chaperones AA Glazier, A Helms, JM Yob, D Mellacheruvu, V Tang, S Bartolone, ... Circulation 132 (suppl_3), A18826-A18826, 2015 | 1 | 2015 |
| Proteomic Signature Predicting Achievement of Very Good Partial Response In Patients with Multiple Myeloma Based On Complementary Label-Free and iTRAQ Quantitative Proteome … D Dytfeld, M Kandarpa, JR Strahler, D Mellacheruvu, S Subramani, ... Blood, The Journal of the American Society of Hematology 116 (21), 1902-1902, 2010 | 1 | 2010 |
| 57 Precision neoantigen discovery using novel algorithms and expanded HLA-ligandome datasets D Mellacheruvu, R Pyke, C Abbott, N Phillips, S Desai, R McClory, J West, ... Journal for ImmunoTherapy of Cancer 8 (Suppl 3), 2020 | | 2020 |
Alexey NesvizhskiiProfessor, University of MichiganVerified email at umich.edu
