| A draft map of the human proteome MS Kim, SM Pinto, D Getnet, RS Nirujogi, SS Manda, R Chaerkady, ... Nature 509 (7502), 575-581, 2014 | 1772 | 2014 |
| A guided tour of the Trans‐Proteomic Pipeline EW Deutsch, L Mendoza, D Shteynberg, T Farrah, H Lam, N Tasman, ... Proteomics 10 (6), 1150-1159, 2010 | 690 | 2010 |
| PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows EW Deutsch, H Lam, R Aebersold EMBO reports 9 (5), 429-434, 2008 | 543 | 2008 |
| Development and validation of a spectral library searching method for peptide identification from MS/MS H Lam, EW Deutsch, JS Eddes, JK Eng, N King, SE Stein, R Aebersold Proteomics 7 (5), 655-667, 2007 | 495 | 2007 |
| iProphet: multi-level integrative analysis of shotgun proteomic data improves peptide and protein identification rates and error estimates D Shteynberg, EW Deutsch, H Lam, JK Eng, Z Sun, N Tasman, ... Molecular & cellular proteomics 10 (12), M111. 007690, 2011 | 425 | 2011 |
| Phosphoproteomic analysis reveals interconnected system-wide responses to perturbations of kinases and phosphatases in yeast B Bodenmiller, S Wanka, C Kraft, J Urban, D Campbell, PG Pedrioli, ... Science signaling 3 (153), rs4-rs4, 2010 | 291 | 2010 |
| A complete mass-spectrometric map of the yeast proteome applied to quantitative trait analysis P Picotti, M Clément-Ziza, H Lam, DS Campbell, A Schmidt, EW Deutsch, ... Nature 494 (7436), 266-270, 2013 | 281 | 2013 |
| A repository of assays to quantify 10,000 human proteins by SWATH-MS G Rosenberger, CC Koh, T Guo, HL Röst, P Kouvonen, BC Collins, ... Scientific data 1 (1), 1-15, 2014 | 275 | 2014 |
| Building consensus spectral libraries for peptide identification in proteomics H Lam, EW Deutsch, JS Eddes, JK Eng, SE Stein, R Aebersold Nature methods 5 (10), 873-875, 2008 | 240 | 2008 |
| Human SRMAtlas: a resource of targeted assays to quantify the complete human proteome U Kusebauch, DS Campbell, EW Deutsch, CS Chu, DA Spicer, ... Cell 166 (3), 766-778, 2016 | 227 | 2016 |
| Building high-quality assay libraries for targeted analysis of SWATH MS data OT Schubert, LC Gillet, BC Collins, P Navarro, G Rosenberger, WE Wolski, ... Nature protocols 10 (3), 426-441, 2015 | 223 | 2015 |
| PhosphoPep—a database of protein phosphorylation sites in model organisms B Bodenmiller, D Campbell, B Gerrits, H Lam, M Jovanovic, P Picotti, ... Nature biotechnology 26 (12), 1339-1340, 2008 | 220 | 2008 |
| A database of mass spectrometric assays for the yeast proteome P Picotti, H Lam, D Campbell, EW Deutsch, H Mirzaei, J Ranish, B Domon, ... Nature methods 5 (11), 913-914, 2008 | 215 | 2008 |
| PhosphoPep—a phosphoproteome resource for systems biology research in Drosophila Kc167 cells B Bodenmiller, J Malmstrom, B Gerrits, D Campbell, H Lam, A Schmidt, ... Molecular systems biology 3 (1), 139, 2007 | 209 | 2007 |
| Data analysis and bioinformatics tools for tandem mass spectrometry in proteomics EW Deutsch, H Lam, R Aebersold Physiological genomics 33 (1), 18-25, 2008 | 177 | 2008 |
| Absolute quantification of microbial proteomes at different states by directed mass spectrometry A Schmidt, M Beck, J Malmström, H Lam, M Claassen, D Campbell, ... Molecular systems biology 7 (1), 510, 2011 | 98 | 2011 |
| Artificial decoy spectral libraries for false discovery rate estimation in spectral library searching in proteomics H Lam, EW Deutsch, R Aebersold Journal of proteome research 9 (1), 605-610, 2010 | 97 | 2010 |
| An open-source computational and data resource to analyze digital maps of immunopeptidomes E Caron, L Espona, DJ Kowalewski, H Schuster, N Ternette, A Alpizar, ... Elife 4, e07661, 2015 | 96 | 2015 |
| MaRiMba: a software application for spectral library-based MRM transition list assembly CA Sherwood, A Eastham, LW Lee, A Peterson, JK Eng, D Shteynberg, ... Journal of proteome research 8 (10), 4396-4405, 2009 | 81 | 2009 |
| Glucose‐6‐phosphate dehydrogenase partitioning in two‐phase aqueous mixed (nonionic/cationic) micellar systems CO Rangel‐Yagui, H Lam, DT Kamei, DIC Wang, A Pessoa Jr, ... Biotechnology and bioengineering 82 (4), 445-456, 2003 | 65 | 2003 |
Eric DeutschInstitute for Systems BiologyVerified email at systemsbiology.org
