Sinan Uğur Umu
Sinan Uğur Umu
Cancer Registry of Norway, Oslo, Norway
Verifierad e-postadress på kreftregisteret.no - Startsida
TitelCiteras avÅr
Robust identification of noncoding RNA from transcriptomes requires phylogenetically-informed sampling
S Lindgreen, SU Umu, ASW Lai, H Eldai, W Liu, S McGimpsey, ...
PLoS computational biology 10 (10), e1003907, 2014
292014
A comprehensive benchmark of RNA–RNA interaction prediction tools for all domains of life
SU Umu, PP Gardner
Bioinformatics 33 (7), 988-996, 2017
222017
A comprehensive profile of circulating RNAs in human serum
SU Umu, H Langseth, C Bucher-Johannessen, B Fromm, A Keller, ...
RNA biology 15 (2), 242-250, 2018
172018
Avoidance of stochastic RNA interactions can be harnessed to control protein expression levels in bacteria and archaea
SU Umu, AM Poole, RCJ Dobson, PP Gardner
eLife 5, 2016
152016
A probabilistic approach to microRNA-target binding
H Oğul, SU Umu, YY Tuncel, MS Akkaya
Biochemical and biophysical research communications 413 (1), 111-115, 2011
112011
A high-resolution map of the human small non-coding transcriptome
T Fehlmann, C Backes, J Alles, U Fischer, M Hart, F Kern, H Langseth, ...
Bioinformatics 34 (10), 1621-1628, 2017
32017
A meta-analysis of bioinformatics software benchmarks reveals that publication-bias unduly influences software accuracy
PP Gardner, JM Paterson, FA Ghomi, SUU Umu, S McGimpsey, A Pawlik
BioRxiv, 092205, 2017
22017
Trainer: A general-purpose trainable short biosequence classifier
H Oqul, AT Kalkan, SU Umu, MS Akkaya
Protein Pept Lett, 2013
22013
PO-096 Natural variation in serum small non-coding rnas–potential biomarkers of cancer
SU Umu, R Lyle, H Langseth, TB Rounge
ESMO Open 3 (Suppl 2), A263-A264, 2018
12018
TaME-seq
S Lagström, SU Umu, M Lepistö, P Ellonen, R Meisal, IK Christiansen, ...
Scientific Reports, 2019
2019
TaME-seq: An efficient sequencing approach for characterisation of HPV genomic variability and chromosomal integration
S Lagström, SU Umu, M Lepistö, P Ellonen, R Meisal, IK Christiansen, ...
Scientific reports 9 (1), 524, 2019
2019
Circulating small non-coding RNAs associated with age, sex, smoking, body mass and physical activity
TB Rounge, SU Umu, A Keller, E Meese, G Ursin, S Tretli, R Lyle, ...
Scientific reports 8 (1), 17650, 2018
2018
PO-073 Small non-coding rna in serum from testicular germ cell tumour patientsidentified by machine learning
J Burton, H Hammer, S Umu, H Langseth, T Grotmol, T Grimsrud, ...
ESMO Open 3 (Suppl 2), A255-A256, 2018
2018
Impact of age, sex, smoking, body mass and physical activity on circulating small non-coding RNA expression profiles
TB Rounge, SU Umu, A Keller, E Meese, G Ursin, S Tretli, R Lyle, ...
Cancer Research 78 (13 Supplement), 524-524, 2018
2018
Natural avoidance of stochastic mRNA: ncRNA interactions can be harnessed to control protein expression levels
SU Umu, AM Poole, RCJ Dobson, PP Gardner
bioRxiv, 033613, 2016
2016
Investigating prokaryotic transcriptomes and the impact of crosstalk between noncoding RNA and messenger RNA interactions
SU Umu
University of Canterbury, 2016
2016
A Probabilistic Method for Prediction of microRNA-target Interactions.
H Ogul, SU Umu, YY Tuncel, MS Akkaya
IJCCI (NCTA), 289-293, 2011
2011
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Artiklar 1–17