Joseph R. Nery
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Human DNA methylomes at base resolution show widespread epigenomic differences
R Lister, M Pelizzola, RH Dowen, RD Hawkins, G Hon, J Tonti-Filippini, ...
nature 462 (7271), 315-322, 2009
39962009
Integrative analysis of 111 reference human epigenomes
A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, A Heravi-Moussavi, ...
Nature 518 (7539), 317-330, 2015
34592015
Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells
R Lister, M Pelizzola, YS Kida, RD Hawkins, JR Nery, G Hon, ...
Nature 471 (7336), 68-73, 2011
15162011
Global epigenomic reconfiguration during mammalian brain development
R Lister, EA Mukamel, JR Nery, M Urich, CA Puddifoot, ND Johnson, ...
Science 341 (6146), 2013
13032013
Widespread dynamic DNA methylation in response to biotic stress
RH Dowen, M Pelizzola, RJ Schmitz, R Lister, JM Dowen, JR Nery, ...
Proceedings of the National Academy of Sciences 109 (32), E2183-E2191, 2012
6662012
Epigenomic analysis of multilineage differentiation of human embryonic stem cells
W Xie, MD Schultz, R Lister, Z Hou, N Rajagopal, P Ray, JW Whitaker, ...
Cell 153 (5), 1134-1148, 2013
5592013
Cistrome and epicistrome features shape the regulatory DNA landscape
RC O’Malley, SC Huang, L Song, MG Lewsey, A Bartlett, JR Nery, M Galli, ...
Cell 165 (5), 1280-1292, 2016
5012016
Patterns of population epigenomic diversity
RJ Schmitz, MD Schultz, MA Urich, JR Nery, M Pelizzola, O Libiger, A Alix, ...
Nature 495 (7440), 193-198, 2013
4452013
Comparison of the transcriptional landscapes between human and mouse tissues
S Lin, Y Lin, JR Nery, MA Urich, A Breschi, CA Davis, A Dobin, C Zaleski, ...
Proceedings of the National Academy of Sciences 111 (48), 17224-17229, 2014
4262014
Human body epigenome maps reveal noncanonical DNA methylation variation
MD Schultz, Y He, JW Whitaker, M Hariharan, EA Mukamel, D Leung, ...
Nature 523 (7559), 212-216, 2015
4082015
Genome-wide association study in Asian populations identifies variants in ETS1 and WDFY4 associated with systemic lupus erythematosus
W Yang, N Shen, DQ Ye, Q Liu, Y Zhang, XX Qian, N Hirankarn, D Ying, ...
PLoS Genet 6 (2), e1000841, 2010
3872010
Epigenomic signatures of neuronal diversity in the mammalian brain
A Mo, EA Mukamel, FP Davis, C Luo, GL Henry, S Picard, MA Urich, ...
Neuron 86 (6), 1369-1384, 2015
3562015
Abnormalities in human pluripotent cells due to reprogramming mechanisms
H Ma, R Morey, RC O'Neil, Y He, B Daughtry, MD Schultz, M Hariharan, ...
Nature 511 (7508), 177-183, 2014
2952014
Epigenomic diversity in a global collection of Arabidopsis thaliana accessions
T Kawakatsu, SC Huang, F Jupe, E Sasaki, RJ Schmitz, MA Urich, ...
Cell 166 (2), 492-505, 2016
2922016
Molecular criteria for defining the naive human pluripotent state
TW Theunissen, M Friedli, Y He, E Planet, RC O’Neil, S Markoulaki, ...
Cell stem cell 19 (4), 502-515, 2016
2572016
Cryptochromes interact directly with PIFs to control plant growth in limiting blue light
UV Pedmale, SC Huang, M Zander, BJ Cole, J Hetzel, K Ljung, PAB Reis, ...
Cell 164 (1-2), 233-245, 2016
2422016
Temporal transcriptional response to ethylene gas drives growth hormone cross-regulation in Arabidopsis
KN Chang, S Zhong, MT Weirauch, G Hon, M Pelizzola, H Li, SC Huang, ...
elife 2, e00675, 2013
2362013
Single-cell methylomes identify neuronal subtypes and regulatory elements in mammalian cortex
C Luo, CL Keown, L Kurihara, J Zhou, Y He, J Li, R Castanon, J Lucero, ...
Science 357 (6351), 600-604, 2017
2032017
Epigenome-wide inheritance of cytosine methylation variants in a recombinant inbred population
RJ Schmitz, Y He, O Valdés-López, SM Khan, T Joshi, MA Urich, JR Nery, ...
Genome research 23 (10), 1663-1674, 2013
2032013
A transcription factor hierarchy defines an environmental stress response network
L Song, SC Huang, A Wise, R Castanon, JR Nery, H Chen, M Watanabe, ...
Science 354 (6312), 2016
1792016
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Artiklar 1–20