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Dina Schneidman
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PatchDock and SymmDock: servers for rigid and symmetric docking
D Schneidman-Duhovny, Y Inbar, R Nussinov, HJ Wolfson
Nucleic acids research 33 (suppl_2), W363-W367, 2005
32762005
Efficient unbound docking of rigid molecules
D Duhovny, R Nussinov, HJ Wolfson
Algorithms in Bioinformatics: Second International Workshop, WABI 2002 Rome …, 2002
9402002
FireDock: a web server for fast interaction refinement in molecular docking
E Mashiach, D Schneidman-Duhovny, N Andrusier, R Nussinov, ...
Nucleic acids research 36 (suppl_2), W229-W232, 2008
7782008
UCSF Chimera, MODELLER, and IMP: an integrated modeling system
Z Yang, K Lasker, D Schneidman-Duhovny, B Webb, CC Huang, ...
Journal of structural biology 179 (3), 269-278, 2012
6582012
FoXS: a web server for rapid computation and fitting of SAXS profiles
D Schneidman-Duhovny, M Hammel, A Sali
Nucleic acids research 38 (suppl_2), W540-W544, 2010
5902010
Accurate SAXS profile computation and its assessment by contrast variation experiments
D Schneidman-Duhovny, M Hammel, JA Tainer, A Sali
Biophysical journal 105 (4), 962-974, 2013
5882013
Putting the pieces together: integrative modeling platform software for structure determination of macromolecular assemblies
D Russel, K Lasker, B Webb, J Velázquez-Muriel, E Tjioe, ...
PLoS biology 10 (1), e1001244, 2012
5382012
FoXS, FoXSDock and MultiFoXS: Single-state and multi-state structural modeling of proteins and their complexes based on SAXS profiles
D Schneidman-Duhovny, M Hammel, JA Tainer, A Sali
Nucleic acids research 44 (W1), W424-W429, 2016
4812016
Mechanism of two classes of cancer mutations in the phosphoinositide 3-kinase catalytic subunit
N Miled, Y Yan, WC Hon, O Perisic, M Zvelebil, Y Inbar, ...
science 317 (5835), 239-242, 2007
4592007
Versatile and multivalent nanobodies efficiently neutralize SARS-CoV-2
Y Xiang, S Nambulli, Z Xiao, H Liu, Z Sang, WP Duprex, ...
Science 370 (6523), 1479-1484, 2020
3612020
PharmaGist: a webserver for ligand-based pharmacophore detection
D Schneidman-Duhovny, O Dror, Y Inbar, R Nussinov, HJ Wolfson
Nucleic acids research 36 (suppl_2), W223-W228, 2008
3502008
ModBase, a database of annotated comparative protein structure models, and associated resources
U Pieper, BM Webb, DT Barkan, D Schneidman-Duhovny, A Schlessinger, ...
Nucleic acids research 39 (suppl_1), D465-D474, 2010
3492010
Taking geometry to its edge: fast unbound rigid (and hinge‐bent) docking
D Schneidman‐Duhovny, Y Inbar, V Polak, M Shatsky, I Halperin, ...
Proteins: Structure, Function, and Bioinformatics 52 (1), 107-112, 2003
3162003
ModBase, a database of annotated comparative protein structure models and associated resources
U Pieper, BM Webb, GQ Dong, D Schneidman-Duhovny, H Fan, SJ Kim, ...
Nucleic acids research 42 (D1), D336-D346, 2014
3132014
Geometry‐based flexible and symmetric protein docking
D Schneidman‐Duhovny, Y Inbar, R Nussinov, HJ Wolfson
Proteins: Structure, Function, and Bioinformatics 60 (2), 224-231, 2005
2632005
HingeProt: automated prediction of hinges in protein structures
U Emekli, D Schneidman‐Duhovny, HJ Wolfson, R Nussinov, T Haliloglu
Proteins: Structure, Function, and Bioinformatics 70 (4), 1219-1227, 2008
2602008
2017 publication guidelines for structural modelling of small-angle scattering data from biomolecules in solution: an update
J Trewhella, AP Duff, D Durand, F Gabel, JM Guss, WA Hendrickson, ...
Acta Crystallographica Section D: Structural Biology 73 (9), 710-728, 2017
2172017
CryptoSite: expanding the druggable proteome by characterization and prediction of cryptic binding sites
P Cimermancic, P Weinkam, TJ Rettenmaier, L Bichmann, DA Keedy, ...
Journal of molecular biology 428 (4), 709-719, 2016
1942016
Structural characterization by cross-linking reveals the detailed architecture of a coatomer-related heptameric module from the nuclear pore complex
Y Shi, J Fernandez-Martinez, E Tjioe, R Pellarin, SJ Kim, R Williams, ...
Molecular & Cellular Proteomics 13 (11), 2927-2943, 2014
1852014
Novel approach for efficient pharmacophore-based virtual screening: method and applications
O Dror, D Schneidman-Duhovny, Y Inbar, R Nussinov, HJ Wolfson
Journal of chemical information and modeling 49 (10), 2333-2343, 2009
1752009
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