| Wobble base-pairing slows in vivo translation elongation in metazoans M Stadler, A Fire Rna 17 (12), 2063-2073, 2011 | 211 | 2011 |
| Dense Bicoid hubs accentuate binding along the morphogen gradient M Mir, A Reimer, JE Haines, XY Li, M Stadler, H Garcia, MB Eisen, ... Genes & Development 31 (17), 1784-1794, 2017 | 172 | 2017 |
| Dynamic multifactor hubs interact transiently with sites of active transcription in Drosophila embryos M Mir, MR Stadler, SA Ortiz, CE Hannon, MM Harrison, X Darzacq, ... Elife 7, e40497, 2018 | 160 | 2018 |
| Convergence of topological domain boundaries, insulators, and polytene interbands revealed by high-resolution mapping of chromatin contacts in the early Drosophila melanogaster … MR Stadler, JE Haines, MB Eisen Elife 6, e29550, 2017 | 92 | 2017 |
| Contributions of mRNA abundance, ribosome loading, and post-or peri-translational effects to temporal repression of C. elegans heterochronic miRNA targets M Stadler, K Artiles, J Pak, A Fire Genome research 22 (12), 2418-2426, 2012 | 77 | 2012 |
| The transcription start site landscape of C. elegans TL Saito, S Hashimoto, SG Gu, JJ Morton, M Stadler, T Blumenthal, A Fire, ... Genome research 23 (8), 1348-1361, 2013 | 63 | 2013 |
| Multimodal RNA-seq using single-strand, double-strand, and CircLigase-based capture yields a refined and extended description of the C. elegans transcriptome AT Lamm, MR Stadler, H Zhang, JI Gent, AZ Fire Genome research 21 (2), 265-275, 2011 | 48 | 2011 |
| Conserved translatome remodeling in nematode species executing a shared developmental transition M Stadler, A Fire PLoS genetics 9 (10), e1003739, 2013 | 45 | 2013 |
| Bacterial Attraction and Quorum Sensing Inhibition in Caenorhabditis elegans Exudates F Kaplan, DV Badri, C Zachariah, R Ajredini, FJ Sandoval, S Roje, ... Journal of chemical ecology 35, 878-892, 2009 | 39 | 2009 |
| Single molecule imaging in live embryos using lattice light-sheet microscopy M Mir, A Reimer, M Stadler, A Tangara, AS Hansen, D Hockemeyer, ... Nanoscale Imaging: Methods and Protocols, 541-559, 2018 | 26 | 2018 |
| Comprehensive whole-genome sequencing of an early-stage primary myelofibrosis patient defines low mutational burden and non-recurrent candidate genes JD Merker, KM Roskin, D Ng, C Pan, DG Fisk, JJ King, R Hoh, M Stadler, ... Haematologica 98 (11), 1689, 2013 | 14 | 2013 |
| A small RNA isolation and sequencing protocol and its application to assay CRISPR RNA biogenesis in bacteria S Silas, N Jain, M Stadler, BXH Fu, A Sánchez-Amat, AZ Fire, J Arribere Bio-protocol 8 (4), e2727-e2727, 2018 | 7 | 2018 |
| Single-nucleus RNA-sequencing in pre-cellularization Drosophila melanogaster embryos AR Albright, MR Stadler, MB Eisen Plos one 17 (6), e0270471, 2022 | 5 | 2022 |
| Atlas… t, patterns from every cell MR Stadler, MB Eisen Science 358 (6360), 172-173, 2017 | 5 | 2017 |
| Translation Kinetic Mapping, Modification and Harmonization JM Barral, A Fire, PS Spencer, M Stadler US Patent App. 13/664,252, 2013 | 4 | 2013 |
| Localization of the pioneer factor GAF to subnuclear foci is driven by DNA binding and required to silence satellite repeat expression MM Gaskill, IV Soluri, AE Branks, AP Boka, MR Stadler, K Vietor, ... bioRxiv, 2022.11. 29.518380, 2022 | 2 | 2022 |
| A chromatin extension model for insulator function based on comparison of high-resolution chromatin conformation capture and polytene banding maps MR Stadler, MB Eisen bioRxiv, 129577, 2017 | 1 | 2017 |
| Translational Modulation as a Consequence of Codon Choice and miRNA Regulation in Caenorhabditis elegans MR Stadler Stanford University, 2012 | 1 | 2012 |
| Caenorhabditis elegans Metabolomics F Kaplan, C Zachariah, R Adjerdini, F Zhang, S Robinette, M Stadler, ... | | |
