Hosein Mohimani
Hosein Mohimani
Assistant Professor, Computational Biology Department, School of Computer Science, Carnegie Mellon
Verified email at andrew.cmu.edu
TitleCited byYear
A Fast Approach for Overcomplete Sparse Decomposition Based on SmoothedNorm
H Mohimani, M Babaie-Zadeh, C Jutten
IEEE Transactions on Signal Processing 57 (1), 289-301, 2008
10212008
Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking
M Wang, JJ Carver, VV Phelan, LM Sanchez, N Garg, Y Peng, ...
Nature biotechnology 34 (8), 828-837, 2016
7052016
Fast Sparse Representation Based on Smoothed ℓ0 Norm
GH Mohimani, M Babaie-Zadeh, C Jutten
International Conference on Independent Component Analysis and Signal†…, 2007
1282007
Mobility modeling, spatial traffic distribution, and probability of connectivity for sparse and dense vehicular ad hoc networks
GH Mohimani, F Ashtiani, A Javanmard, M Hamdi
IEEE Transactions on Vehicular Technology 58 (4), 1998-2007, 2008
1132008
American gut: an open platform for citizen science microbiome research
D McDonald, E Hyde, JW Debelius, JT Morton, A Gonzalez, G Ackermann, ...
MSystems 3 (3), e00031-18, 2018
1012018
Cytotoxic Veraguamides, Alkynyl Bromide-Containing Cyclic Depsipeptides from the Marine Cyanobacterium cf. Oscillatoria margaritifera
E Mevers, WT Liu, N Engene, H Mohimani, T Byrum, PA Pevzner, ...
Journal of natural products 74 (5), 928-936, 2011
882011
Dereplication of peptidic natural products through database search of mass spectra
H Mohimani, A Gurevich, A Mikheenko, N Garg, LF Nothias, A Ninomiya, ...
Nature chemical biology 13 (1), 30, 2017
772017
Estimating the mixing matrix in Sparse Component Analysis (SCA) based on partial k-dimensional subspace clustering
FM Naini, GH Mohimani, M Babaie-Zadeh, C Jutten
Neurocomputing 71 (10-12), 2330-2343, 2008
772008
Automated genome mining of ribosomal peptide natural products
H Mohimani, RD Kersten, WT Liu, M Wang, SO Purvine, S Wu, HM Brewer, ...
ACS chemical biology 9 (7), 1545-1551, 2014
732014
Complex-valued sparse representation based on smoothed ℓ0norm
GH Mohimani, M Babaie-Zadeh, C Jutten
2008 IEEE International Conference on Acoustics, Speech and Signal†…, 2008
692008
NRPquest: coupling mass spectrometry and genome mining for nonribosomal peptide discovery
H Mohimani, WT Liu, RD Kersten, BS Moore, PC Dorrestein, PA Pevzner
Journal of natural products 77 (8), 1902-1909, 2014
522014
Dereplication, sequencing and identification of peptidic natural products: from genome mining to peptidogenomics to spectral networks
H Mohimani, PA Pevzner
Natural product reports 33 (1), 73-86, 2016
412016
Multiplex de novo sequencing of peptide antibiotics
H Mohimani, WT Liu, YL Yang, SP GaudÍncio, W Fenical, PC Dorrestein, ...
Journal of Computational Biology 18 (11), 1371-1381, 2011
392011
Sequencing cyclic peptides by multistage mass spectrometry
H Mohimani, YL Yang, WT Liu, PW Hsieh, PC Dorrestein, PA Pevzner
Proteomics 11 (18), 3642-3650, 2011
362011
Cycloquest: identification of cyclopeptides via database search of their mass spectra against genome databases
H Mohimani, WT Liu, JS Mylne, AG Poth, ML Colgrave, D Tran, ...
Journal of proteome research 10 (10), 4505-4512, 2011
352011
Dereplication of microbial metabolites through database search of mass spectra
H Mohimani, A Gurevich, A Shlemov, A Mikheenko, A Korobeynikov, ...
Nature communications 9 (1), 1-12, 2018
342018
Sparse Recovery using Smoothed (SL0): Convergence Analysis
H Mohimani, M Babaie-Zadeh, I Gorodnitsky, C Jutten
arXiv preprint arXiv:1001.5073, 2010
342010
Increased diversity of peptidic natural products revealed by modification-tolerant database search of mass spectra
A Gurevich, A Mikheenko, A Shlemov, A Korobeynikov, H Mohimani, ...
Nature microbiology 3 (3), 319-327, 2018
262018
A new approach to evaluating statistical significance of spectral identifications
H Mohimani, S Kim, PA Pevzner
Journal of proteome research 12 (4), 1560-1568, 2013
192013
Exact calculation of pattern probabilities
J Acharya, H Das, H Mohimani, A Orlitsky, S Pan
2010 IEEE International Symposium on Information Theory, 1498-1502, 2010
142010
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Articles 1–20