| MDTraj: a modern open library for the analysis of molecular dynamics trajectories RT McGibbon, KA Beauchamp, MP Harrigan, C Klein, JM Swails, ... Biophysical journal 109 (8), 1528-1532, 2015 | 733 | 2015 |
| OpenMM 4: A Reusable, Extensible, Hardware Independent Library for High Performance Molecular Simulation PK Eastman, MS Friedrichs, JD Chodera, RJ Radmer, CM Bruns, JP Ku, ... Journal of Chemical Theory and Computation, 0 | 504 | |
| MSMBuilder2: modeling conformational dynamics on the picosecond to millisecond scale KA Beauchamp, GR Bowman, TJ Lane, L Maibaum, IS Haque, VS Pande Journal of chemical theory and computation 7 (10), 3412-3419, 2011 | 341 | 2011 |
| To milliseconds and beyond: challenges in the simulation of protein folding TJ Lane, D Shukla, KA Beauchamp, VS Pande Current opinion in structural biology 23 (1), 58-65, 2013 | 331 | 2013 |
| Structure of photosystem II and substrate binding at room temperature ID Young, M Ibrahim, R Chatterjee, S Gul, FD Fuller, S Koroidov, ... Nature 540 (7633), 453-457, 2016 | 250 | 2016 |
| Imaging molecular motion: Femtosecond x-ray scattering of an electrocyclic chemical reaction MP Minitti, JM Budarz, A Kirrander, JS Robinson, D Ratner, TJ Lane, ... Physical review letters 114 (25), 255501, 2015 | 233 | 2015 |
| Markov state model reveals folding and functional dynamics in ultra-long MD trajectories TJ Lane, GR Bowman, K Beauchamp, VA Voelz, VS Pande Journal of the American Chemical Society 133 (45), 18413-18419, 2011 | 154 | 2011 |
| Retinal isomerization in bacteriorhodopsin captured by a femtosecond x-ray laser P Nogly, T Weinert, D James, S Carbajo, D Ozerov, A Furrer, D Gashi, ... Science 361 (6398), 2018 | 146 | 2018 |
| Chromophore twisting in the excited state of a photoswitchable fluorescent protein captured by time-resolved serial femtosecond crystallography N Coquelle, M Sliwa, J Woodhouse, G Schirò, V Adam, A Aquila, ... Nature chemistry 10 (1), 31-37, 2018 | 85 | 2018 |
| Liquid explosions induced by X-ray laser pulses CA Stan, D Milathianaki, H Laksmono, RG Sierra, TA McQueen, ... Nature Physics 12 (10), 966-971, 2016 | 83 | 2016 |
| Quantification of the layer of hydration of a supported lipid bilayer TJ Zwang, WR Fletcher, TJ Lane, MS Johal Langmuir 26 (7), 4598-4601, 2010 | 61 | 2010 |
| Linac Coherent Light Source data analysis using psana D Damiani, M Dubrovin, I Gaponenko, W Kroeger, TJ Lane, A Mitra, ... Journal of Applied Crystallography 49 (2), 672-679, 2016 | 56 | 2016 |
| OnDA: online data analysis and feedback for serial X-ray imaging V Mariani, A Morgan, CH Yoon, TJ Lane, TA White, C O'Grady, M Kuhn, ... Journal of applied crystallography 49 (3), 1073-1080, 2016 | 54 | 2016 |
| Toward structural femtosecond chemical dynamics: imaging chemistry in space and time MP Minitti, JM Budarz, A Kirrander, J Robinson, TJ Lane, D Ratner, ... Faraday discussions 171, 81-91, 2014 | 48 | 2014 |
| Dual-beam polarization interferometry resolves mechanistic aspects of polyelectrolyte adsorption TJ Lane, WR Fletcher, MV Gormally, MS Johal Langmuir 24 (19), 10633-10636, 2008 | 47 | 2008 |
| Electron ghost imaging S Li, F Cropp, K Kabra, TJ Lane, G Wetzstein, P Musumeci, D Ratner Physical review letters 121 (11), 114801, 2018 | 45 | 2018 |
| Selenium single-wavelength anomalous diffraction de novo phasing using an X-ray-free electron laser MS Hunter, CH Yoon, H DeMirci, RG Sierra, EH Dao, R Ahmadi, F Aksit, ... Nature communications 7 (1), 1-5, 2016 | 37 | 2016 |
| Coherent X-rays reveal the influence of cage effects on ultrafast water dynamics F Perakis, G Camisasca, TJ Lane, A Späh, KT Wikfeldt, JA Sellberg, ... Nature communications 9 (1), 1-10, 2018 | 36 | 2018 |
| Observation of correlated X-ray scattering at atomic resolution D Mendez, TJ Lane, J Sung, J Sellberg, C Levard, H Watkins, AE Cohen, ... Philosophical Transactions of the Royal Society B: Biological Sciences 369 …, 2014 | 32 | 2014 |
| Femtosecond mega-electron-volt electron microdiffraction X Shen, RK Li, U Lundström, TJ Lane, AH Reid, SP Weathersby, XJ Wang Ultramicroscopy 184, 172-176, 2018 | 30 | 2018 |
Vijay PandeProfessor of Chemistry, Stanford UniversityVerified email at stanford.edu
