| TISCH: a comprehensive web resource enabling interactive single-cell transcriptome visualization of tumor microenvironment D Sun, J Wang, Y Han, X Dong, J Ge, R Zheng, X Shi, B Wang, Z Li, ... Nucleic acids research 49 (D1), D1420-D1430, 2021 | 565 | 2021 |
| TISCH2: expanded datasets and new tools for single-cell transcriptome analyses of the tumor microenvironment Y Han, Y Wang, X Dong, D Sun, Z Liu, J Yue, H Wang, T Li, C Wang Nucleic acids research 51 (D1), D1425-D1431, 2023 | 91 | 2023 |
| Cistrome-GO: a web server for functional enrichment analysis of transcription factor ChIP-seq peaks S Li, C Wan, R Zheng, J Fan, X Dong, CA Meyer, XS Liu Nucleic acids research 47 (W1), W206-W211, 2019 | 65 | 2019 |
| Determinants of transcription factor regulatory range CH Chen, R Zheng, C Tokheim, X Dong, J Fan, C Wan, Q Tang, M Brown, ... Nature communications 11 (1), 2472, 2020 | 44 | 2020 |
| Stage-specific H3K9me3 occupancy ensures retrotransposon silencing in human pre-implantation embryos R Xu, S Li, Q Wu, C Li, M Jiang, L Guo, M Chen, L Yang, X Dong, H Wang, ... Cell Stem Cell 29 (7), 1051-1066. e8, 2022 | 38 | 2022 |
| Cistrome Data Browser and Toolkit: analyzing human and mouse genomic data using compendia of ChIP-seq and chromatin accessibility data R Zheng, X Dong, C Wan, X Shi, X Zhang, CA Meyer Quantitative Biology 8, 267-276, 2020 | 11 | 2020 |
| HUSCH: an integrated single-cell transcriptome atlas for human tissue gene expression visualization and analyses X Shi, Z Yu, P Ren, X Dong, X Ding, J Song, J Zhang, T Li, C Wang Nucleic Acids Research 51 (D1), D1029-D1037, 2023 | 10 | 2023 |
| Single-cell gene regulation network inference by large-scale data integration X Dong, K Tang, Y Xu, H Wei, T Han, C Wang Nucleic Acids Research 50 (21), e126-e126, 2022 | 8 | 2022 |
| Single-cell assignment using multiple-adversarial domain adaptation network with large-scale references P Ren, X Shi, Z Yu, X Dong, X Ding, J Wang, L Sun, Y Yan, J Hu, P Zhang, ... Cell Reports Methods 3 (9), 2023 | 2* | 2023 |
Chenfei WangProfessor of Bioinformatics, Tongji UniversityVerified email at tongji.edu.cn
