Xiaoqiu Huang

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Ankit AgrawalResearch Professor, Northwestern UniversityVerified email at eecs.northwestern.edu
Webb MillerPenn State University, UC Santa Barbara, ArizonaVerified email at bx.psu.edu
Geo PerteaData/Software Engineer, Lieber Institute for Brain DevelopmentVerified email at jhu.edu
John QuackenbushHarvard T.H. Chan School of Public Health, Channing Division of Network Medicine, and Dana-FarberVerified email at hsph.harvard.edu
Srinivas AluruRegents Professor and Executive Director of Institute for Data Engineering and Science, Georgia TechVerified email at cc.gatech.edu
Joseph A. WhiteDana-Farber Cancer InstituteVerified email at jimmy.harvard.edu
Razvan SultanaBioinformatician, Garvan Institute, Sydney, AustraliaVerified email at garvan.org.au
Ross C. HardisonProfessor Emeritus of Biochemistry and Molecular Biology, The Pennsylvania State UniversityVerified email at psu.edu
Joshi Chandrashekhar P.Professor of Plant Molecular GeneticsVerified email at mtu.edu
Mark D AdamsThe Jackson Laboratory for Genomic MedicineVerified email at jax.org
Richard K. Wilson, Ph.D.Nationwide Children's Hospital; Ohio State UniversityVerified email at NationwideChildrens.org
Zhixi SuFudan UniversityVerified email at fudan.edu.cn
Jun YuProfessor of Genomics and Bioinformatics, Beijing Institute of Genomics, Chinese Academy of SciencesVerified email at big.ac.cn
Subodh K Srivastava Ph.D.USDA-ARS Animal Parasitic Diseases LabVerified email at usda.gov
Jinghui ZhangSt Jude Children's Research HospitalVerified email at stjude.org
RL WarrenGenome Sciences Centre, BC CancerVerified email at bcgsc.ca
Tao JiangUC RiversideVerified email at cs.ucr.edu
Yaw-Ling LinDept Comput Sci and Info Engineering, Providence University, TaiwanVerified email at pu.edu.tw
Douglas BrutlagProfessor Emeritus of Biochemistry and Medicine, Stanford UniversityVerified email at stanford.edu
Gene MyersMax-Planck Institute for Molecular Cell Biology & GeneticsVerified email at mpi-cbg.de

Xiaoqiu Huang

Professor of Computer Science, Iowa State University

Verified email at iastate.edu - Homepage

Bioinformatics


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
CAP3: A DNA sequence assembly program X Huang, A Madan Genome research 9 (9), 868-877, 1999	6268	1999
Initial sequence of the chimpanzee genome and comparison with the human genome Chimpanzee Sequencing and Analysis Consortium Waterson Robert H. waterston ... Nature 437 (7055), 69-87, 2005	2324	2005
TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets G Pertea, X Huang, F Liang, V Antonescu, R Sultana, S Karamycheva, ... Bioinformatics 19 (5), 651-652, 2003	1973	2003
Evolutionary and biomedical insights from the rhesus macaque genome RA Gibbs, J Rogers, MG Katze, R Bumgarner, GM Weinstock, ER Mardis, ... science 316 (5822), 222-234, 2007	1516	2007
A time-efficient, linear-space local similarity algorithm X Huang, W Miller Advances in applied mathematics 12 (3), 337-357, 1991	1311	1991
Genome analysis of the platypus reveals unique signatures of evolution Nature 453 (7192), 175-183, 2008	781	2008
Assemblathon 1: a competitive assessment of de novo short read assembly methods D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ... Genome research 21 (12), 2224-2241, 2011	638	2011
Context sequences of translation initiation codon in plants CP Joshi, H Zhou, X Huang, VL Chiang Plant molecular biology 35, 993-1001, 1997	498	1997
PCAP: a whole-genome assembly program X Huang, J Wang, S Aluru, SP Yang, LD Hillier Genome research 13 (9), 2164-2170, 2003	406	2003
A contig assembly program based on sensitive detection of fragment overlaps X Huang Genomics 14 (1), 18-25, 1992	392	1992
Over 20% of human transcripts might form sense–antisense pairs J Chen, M Sun, WJ Kent, X Huang, H Xie, W Wang, G Zhou, RZ Shi, ... Nucleic acids research 32 (16), 4812-4820, 2004	388	2004
A tool for analyzing and annotating genomic sequences X Huang, MD Adams, H Zhou, AR Kerlavage Genomics 46 (1), 37-45, 1997	267	1997
A space-efficient algorithm for local similarities X Huang, RC Hardison, W Miller Bioinformatics 6 (4), 373-381, 1990	267	1990
Evolution of alternative splicing after gene duplication Z Su, J Wang, J Yu, X Huang, X Gu Genome research 16 (2), 182-189, 2006	178	2006
An improved sequence assembly program X Huang Genomics 33 (1), 21-31, 1996	156	1996
Generation and annotation of the DNA sequences of human chromosomes 2 and 4 LDW Hillier, TA Graves, RS Fulton, LA Fulton, KH Pepin, P Minx, ... Nature 434 (7034), 724-731, 2005	132	2005
A generalized global alignment algorithm X Huang, KM Chao Bioinformatics 19 (2), 228-233, 2003	109	2003
Methods for comparing a DNA sequence with a protein sequence X Huang, J Zhang Bioinformatics 12 (6), 497-506, 1996	95	1996
Parallelization of a local similarity algorithm X Huang, W Miller, S Schwartz, RC Hardison Bioinformatics 8 (2), 155-165, 1992	91	1992
A space-efficient parallel sequence comparison algorithm for a message-passing multiprocessor X Huang International Journal of Parallel Programming 18 (3), 223-239, 1989	58	1989

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