Bryan R Helm
Bryan R Helm
Statistical Geneticist @ Vanderbilt University Medical Center
Verified email at
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SALMON: survival analysis learning with multi-omics neural networks on breast cancer
Z Huang, X Zhan, S Xiang, TS Johnson, B Helm, CY Yu, J Zhang, ...
Frontiers in genetics 10, 166, 2019
BERMUDA: a novel deep transfer learning method for single-cell RNA sequencing batch correction reveals hidden high-resolution cellular subtypes
T Wang, TS Johnson, W Shao, Z Lu, BR Helm, J Zhang, K Huang
Genome biology 20, 1-15, 2019
Deep learning-based cancer survival prognosis from RNA-seq data: approaches and evaluations
Z Huang, TS Johnson, Z Han, B Helm, S Cao, C Zhang, P Salama, ...
BMC medical genomics 13, 1-12, 2020
Metamorphosis is induced by food absence rather than a critical weight in the solitary bee, Osmia lignaria
BR Helm, JP Rinehart, GD Yocum, KJ Greenlee, JH Bowsher
Proceedings of the National Academy of Sciences 114 (41), 10924-10929, 2017
The geometric framework for nutrition reveals interactions between protein and carbohydrate during larval growth in honey bees
BR Helm, GP Slater, A Rajamohan, GD Yocum, KJ Greenlee, JH Bowsher
Biology open 6 (6), 872-880, 2017
Correlation analysis of histopathology and proteogenomics data for breast cancer
X Zhan, J Cheng, Z Huang, Z Han, B Helm, X Liu, J Zhang, TF Wang, D Ni, ...
Molecular & Cellular Proteomics 18 (8), S37-S51, 2019
Percent lipid is associated with body size but not task in the bumble bee Bombus impatiens
MJ Couvillon, JM Jandt, J Bonds, BR Helm, A Dornhaus
Journal of Comparative Physiology A 197, 1097-1104, 2011
Mass and volume growth of an insect tracheal system within a single instar
BR Helm, G Davidowitz
Journal of Experimental Biology 216 (24), 4703-4711, 2013
Micro-computed tomography of pupal metamorphosis in the solitary bee Megachile rotundata
BR Helm, S Payne, JP Rinehart, GD Yocum, JH Bowsher, KJ Greenlee
Arthropod structure & development 47 (5), 521-528, 2018
Extended hypoxia in the alfalfa leafcutting bee, Megachile rotundata, increases survival but causes sub-lethal effects
H Abdelrahman, JP Rinehart, GD Yocum, KJ Greenlee, BR Helm, ...
Journal of insect physiology 64, 81-89, 2014
Spatial cell type composition in normal and Alzheimers human brains is revealed using integrated mouse and human single cell RNA sequencing
TS Johnson, S Xiang, BR Helm, ZB Abrams, P Neidecker, R Machiraju, ...
Scientific reports 10 (1), 18014, 2020
Body and Wing Allometries Reveal Flight-Fecundity Tradeoff in Response to Larval Provisioning in Osmia lignaria (Hymenoptera: Megachilidae)
BR Helm, MA Baldwin, JP Rinehart, GD Yocum, KJ Greenlee, ...
Journal of Insect Science 21 (3), 11, 2021
Predicting performance and plasticity in the development of respiratory structures and metabolic systems
KJ Greenlee, KL Montooth, BR Helm
Integrative and Comparative Biology 54 (2), 307-322, 2014
Comparison of the chemical compositions of the cuticle and Dufour’s gland of two solitary bee species from laboratory and field conditions
TL Pitts-Singer, MM Hagen, BR Helm, S Highland, JS Buckner, WP Kemp
Journal of chemical ecology 43, 451-468, 2017
Phenotypic integration in an extended phenotype: among‐individual variation in nest‐building traits of the alfalfa leafcutting bee (Megachile rotundata)
R Royauté, ES Wilson, BR Helm, RE Mallinger, J Prasifka, KJ Greenlee, ...
Journal of evolutionary biology 31 (7), 944-956, 2018
A common framework for the regulation of growth and size: Stepping away from the trees to see the forest
G Davidowitz, BR Helm
Integrative Organismal Biology, 207-217, 2014
Gene co-expression networks restructured gene fusion in rhabdomyosarcoma cancers
BR Helm, X Zhan, PH Pandya, ME Murray, KE Pollok, JL Renbarger, ...
Genes 10 (9), 665, 2019
Evidence of a hemolymph-born factor that induces onset of maturation in Manduca sexta larvae
BR Helm, G Davidowitz
Journal of insect physiology 78, 78-86, 2015
SALMON: survival analysis learning with multi-omics neural networks on breast cancer. Front Genet 10: 166
Z Huang, X Zhan, S Xiang, TS Johnson, B Helm, CY Yu, J Zhang, ...
Integration of Mouse and Human Single-cell RNA Sequencing Infers Spatial Cell-type Composition in Human Brains
TS Johnson, ZB Abrams, BR Helm, P Neidecker, R Machiraju, Y Zhang, ...
bioRxiv, 527499, 2019
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