| Distinct structural transitions of chromatin topological domains correlate with coordinated hormone-induced gene regulation F Le Dily, D Bau, A Pohl, GP Vicent, F Serra, D Soronellas, G Castellano, ... Genes & development 28 (19), 2151-2162, 2014 | 348 | 2014 |
| The three-dimensional folding of the α-globin gene domain reveals formation of chromatin globules D Bał, A Sanyal, BR Lajoie, E Capriotti, M Byron, JB Lawrence, J Dekker, ... Nature structural & molecular biology 18 (1), 107-114, 2011 | 346 | 2011 |
| The three-dimensional architecture of a bacterial genome and its alteration by genetic perturbation MA Umbarger, E Toro, MA Wright, GJ Porreca, D Bau, SH Hong, MJ Fero, ... Molecular cell 44 (2), 252-264, 2011 | 301 | 2011 |
| Automatic analysis and 3D-modelling of Hi-C data using TADbit reveals structural features of the fly chromatin colors F Serra, D Bał, M Goodstadt, D Castillo, GJ Filion, MA Marti-Renom PLoS computational biology 13 (7), e1005665, 2017 | 290 | 2017 |
| Distill: a suite of web servers for the prediction of one-, two-and three-dimensional structural features of proteins D Baś, AJM Martin, C Mooney, A Vullo, I Walsh, G Pollastri BMC bioinformatics 7, 1-8, 2006 | 112 | 2006 |
| Restraint-based three-dimensional modeling of genomes and genomic domains F Serra, M Di Stefano, YG Spill, Y Cuartero, M Goodstadt, D Bał, ... FEBS letters 589 (20), 2987-2995, 2015 | 104 | 2015 |
| Defined chromosome structure in the genome-reduced bacterium Mycoplasma pneumoniae M Trussart, E Yus, S Martinez, D Bau, YO Tahara, T Pengo, M Widjaja, ... Nature communications 8 (1), 14665, 2017 | 103 | 2017 |
| Genome structure determination via 3C-based data integration by the Integrative Modeling Platform D Bau, MA Marti-Renom Methods 58 (3), 300-306, 2012 | 98 | 2012 |
| Chromatin globules: a common motif of higher order chromosome structure? A Sanyal, D Bał, MA Martķ-Renom, J Dekker Current opinion in cell biology 23 (3), 325-331, 2011 | 91 | 2011 |
| Impact of fgd1 and ddn Diversity in Mycobacterium tuberculosis Complex on In Vitro Susceptibility to PA-824 S Feuerriegel, CU Köser, D Bau, S Rüsch-Gerdes, DK Summers, ... Antimicrobial agents and chemotherapy 55 (12), 5718-5722, 2011 | 81 | 2011 |
| Assessing the limits of restraint-based 3D modeling of genomes and genomic domains M Trussart, F Serra, D Bau, I Junier, L Serrano, MA Marti-Renom Nucleic acids research 43 (7), 3465-3477, 2015 | 73 | 2015 |
| Ab initio and template-based prediction of multi-class distance maps by two-dimensional recursive neural networks I Walsh, D Bał, AJM Martin, C Mooney, A Vullo, G Pollastri BMC structural biology 9, 1-20, 2009 | 64 | 2009 |
| Structure determination of genomic domains by satisfaction of spatial restraints D Bał, MA Marti-Renom Chromosome research 19, 25-35, 2011 | 62 | 2011 |
| The conformation of yeast chromosome III is mating type dependent and controlled by the recombination enhancer JM Belton, BR Lajoie, S Audibert, S Cantaloube, I Lassadi, I Goiffon, ... Cell reports 13 (9), 1855-1867, 2015 | 44 | 2015 |
| Structural features of the fly chromatin colors revealed by automatic three-dimensional modeling F Serra, D Bał, G Filion, MA Marti-Renom bioRxiv, 036764, 2016 | 35 | 2016 |
| Refinement of unbound protein docking studies using biological knowledge P Heuser, D Bau, P Benkert, D Schomburg PROTEINS: Structure, Function, and Bioinformatics 61 (4), 1059-1067, 2005 | 16 | 2005 |
| DISTILL: A MACHINE LEARNING APPROACH TO AB INITIO PROTEIN STRUCTURE PREDICTION G Pollastri, D Baś, A Vullo Analysis of biological data: a soft computing approach, 153-181, 2007 | 11 | 2007 |
| Impact of chromosome fusions on 3D genome organization and gene expression in budding yeast M Di Stefano, F Di Giovanni, V Pozharskaia, M Gomar-Alba, D Bał, ... Genetics 214 (3), 651-667, 2020 | 10 | 2020 |
| Long-range information and physicality constraints improve predicted protein contact maps AJM Martin, D Bau, A Vullo, I Walsh, G Pollastri Journal of Bioinformatics and Computational Biology 6 (05), 1001-1020, 2008 | 5 | 2008 |
| Enhancer-driven 3D chromatin domain folding modulates transcription in human mammary tumor cells S Kocanova, F Raynal, I Goiffon, BA Oksuz, D Baś, A Kamgoué, ... Life Science Alliance 7 (2), 2024 | 1 | 2024 |
Marc A. Marti-RenomICREA Research Professor @ CNAG & CRGVerified email at cnag.eu
