Webb Miller
Webb Miller
Penn State University, UC Santa Barbara, Arizona
Verified email at bx.psu.edu
Title
Cited by
Cited by
Year
Basic local alignment search tool
SF Altschul, W Gish, W Miller, EW Myers, DJ Lipman
Journal of molecular biology 215 (3), 403-410, 1990
149523*1990
Initial sequencing and comparative analysis of the mouse genome
RH Waterston, K Lindblad-Toh, E Birney, J Rogers, JF Abril, P Agarwal, ...
Nature 420 (6915), 520-562, 2002
69682002
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
ENCODE Project Consortium
nature 447 (7146), 799, 2007
50132007
A greedy algorithm for aligning DNA sequences
Z Zhang, S Schwartz, L Wagner, W Miller
Journal of Computational biology 7 (1-2), 203-214, 2000
41592000
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
A Siepel, G Bejerano, JS Pedersen, AS Hinrichs, M Hou, K Rosenbloom, ...
Genome research 15 (8), 1034-1050, 2005
31972005
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
LDW Hillier, W Miller, E Birney, W Warren, RC Hardison, CP Ponting, ...
Nature 423 (10), 695-777, 2014
22742014
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
SF Altshul
Nucleic Acids Res 25, 3389-3402, 1997
2233*1997
Genome sequence of the Brown Norway rat yields insights into mammalian evolution
RA Gibbs, GM Weinstock, ML Metzker, DM Muzny, EJ Sodergren, ...
Nature 428 (6982), 493-520, 2004
21232004
Galaxy: a platform for interactive large-scale genome analysis
B Giardine, C Riemer, RC Hardison, R Burhans, L Elnitski, P Shah, ...
Genome research 15 (10), 1451-1455, 2005
20732005
Complete genome sequence of Salmonella enterica serovar Typhimurium LT2
M McClelland, KE Sanderson, J Spieth, SW Clifton, P Latreille, L Courtney, ...
Nature 413 (6858), 852-856, 2001
19572001
Optimal alignments in linear space
EW Myers, W Miller
Bioinformatics 4 (1), 11-17, 1988
17371988
Human–mouse alignments with BLASTZ
S Schwartz, WJ Kent, A Smit, Z Zhang, R Baertsch, RC Hardison, ...
Genome research 13 (1), 103-107, 2003
14252003
Aligning multiple genomic sequences with the threaded blockset aligner
M Blanchette, WJ Kent, C Riemer, L Elnitski, AFA Smit, KM Roskin, ...
Genome research 14 (4), 708-715, 2004
13562004
PipMaker—a web server for aligning two genomic DNA sequences
S Schwartz, Z Zhang, KA Frazer, A Smit, C Riemer, J Bouck, R Gibbs, ...
Genome research 10 (4), 577-586, 2000
13002000
Evolutionary and biomedical insights from the rhesus macaque genome
RA Gibbs, J Rogers, MG Katze, R Bumgarner, GM Weinstock, ER Mardis, ...
Science 316 (5822), 222-234, 2007
11652007
A time-efficient, linear-space local similarity algorithm
X Huang, W Miller
Advances in Applied Mathematics 12 (3), 337-357, 1991
11121991
Identification of a coordinate regulator of interleukins 4, 13, and 5 by cross-species sequence comparisons
GG Loots, RM Locksley, CM Blankespoor, ZE Wang, W Miller, EM Rubin, ...
Science 288 (5463), 136-140, 2000
9162000
A computer program for aligning a cDNA sequence with a genomic DNA sequence
L Florea, G Hartzell, Z Zhang, GM Rubin, W Miller
Genome research 8 (9), 967-974, 1998
9071998
Evolution's cauldron: duplication, deletion, and rearrangement in the mouse and human genomes
WJ Kent, R Baertsch, A Hinrichs, W Miller, D Haussler
Proceedings of the National Academy of Sciences 100 (20), 11484-11489, 2003
8082003
Comparative analyses of multi-species sequences from targeted genomic regions
JW Thomas, JW Touchman, RW Blakesley, GG Bouffard, ...
Nature 424 (6950), 788-793, 2003
7222003
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