Antony Kaspi
Antony Kaspi
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Genome-wide analysis distinguishes hyperglycemia regulated epigenetic signatures of primary vascular cells
L Pirola, A Balcerczyk, RW Tothill, I Haviv, A Kaspi, S Lunke, M Ziemann, ...
Genome research 21 (10), 1601-1615, 2011
Deep sequencing reveals increased DNA methylation in chronic rat epilepsy
K Kobow, A Kaspi, KN Harikrishnan, K Kiese, M Ziemann, I Khurana, ...
Acta neuropathologica 126 (5), 741-756, 2013
Multicellular transcriptional analysis of mammalian heart regeneration
GA Quaife-Ryan, CB Sim, M Ziemann, A Kaspi, H Rafehi, M Ramialison, ...
Circulation 136 (12), 1123-1139, 2017
Epigenetic regulation of cell type–specific expression patterns in the human mammary epithelium
R Maruyama, S Choudhury, A Kowalczyk, M Bessarabova, ...
PLoS genetics 7 (4), e1001369, 2011
Molecular profiling of human mammary gland links breast cancer risk to a p27+ cell population with progenitor characteristics
S Choudhury, V Almendro, VF Merino, Z Wu, R Maruyama, Y Su, ...
Cell stem cell 13 (1), 117-130, 2013
Vascular histone deacetylation by pharmacological HDAC inhibition
H Rafehi, A Balcerczyk, S Lunke, A Kaspi, M Ziemann, KN Harikrishnan, ...
Genome research 24 (8), 1271-1284, 2014
Etiology matters–genomic DNA methylation patterns in three rat models of acquired epilepsy
KJ Dębski, A Pitkanen, N Puhakka, AM Bot, I Khurana, KN Harikrishnan, ...
Scientific reports 6 (1), 1-14, 2016
Dynamic changes in the cardiac methylome during postnatal development
CB Sim, M Ziemann, A Kaspi, KN Harikrishnan, J Ooi, I Khurana, L Chang, ...
The FASEB Journal 29 (4), 1329-1343, 2015
Hepatitis C virus leaves an epigenetic signature post cure of infection by direct-acting antivirals
S Perez, A Kaspi, T Domovitz, A Davidovich, A Lavi-Itzkovitz, T Meirson, ...
PLoS genetics 15 (6), e1008181, 2019
Evaluation of microRNA alignment techniques
M Ziemann, A Kaspi, A El-Osta
Rna 22 (8), 1120-1138, 2016
Combining target enrichment with barcode multiplexing for high throughput SNP discovery
N Cummings, R King, A Rickers, A Kaspi, S Lunke, I Haviv, JBM Jowett
BMC genomics 11 (1), 1-8, 2010
Genomic DNA methylation distinguishes subtypes of human focal cortical dysplasia
K Kobow, M Ziemann, H Kaipananickal, I Khurana, A Mühlebner, ...
Epilepsia 60 (6), 1091-1103, 2019
Digital expression explorer 2: a repository of uniformly processed RNA sequencing data
M Ziemann, A Kaspi, A El-Osta
Gigascience 8 (4), giz022, 2019
Lipoxins Regulate the Early Growth Response–1 Network and Reverse Diabetic Kidney Disease
EP Brennan, M Mohan, A McClelland, C Tikellis, M Ziemann, A Kaspi, ...
Journal of the American Society of Nephrology 29 (5), 1437-1448, 2018
Rapid development of non-alcoholic steatohepatitis in Psammomys obesus (Israeli sand rat)
B Spolding, T Connor, C Wittmer, LLF Abreu, A Kaspi, M Ziemann, G Kaur, ...
PloS One 9 (3), e92656, 2014
Transcription factors Tp73, Cebpd, Pax6, and Spi1 rather than DNA methylation regulate chronic transcriptomics changes after experimental traumatic brain injury
A Lipponen, A El-Osta, A Kaspi, M Ziemann, I Khurana, KN Harikrishnan, ...
Acta neuropathologica communications 6 (1), 1-16, 2018
Creating reusable tools from scripts: the Galaxy Tool Factory
R Lazarus, A Kaspi, M Ziemann, Galaxy Team
Bioinformatics 28 (23), 3139-3140, 2012
Systems approach to the pharmacological actions of HDAC inhibitors reveals EP300 activities and convergent mechanisms of regulation in diabetes
H Rafehi, A Kaspi, M Ziemann, J Okabe, TC Karagiannis, A El-Osta
Epigenetics 12 (11), 991-1003, 2017
DNA methylation regulates hypothalamic gene expression linking parental diet during pregnancy to the offspring’s risk of obesity in Psammomys obesus
I Khurana, A Kaspi, M Ziemann, T Block, T Connor, B Spolding, A Cooper, ...
International Journal of Obesity 40 (7), 1079-1088, 2016
Diet during pregnancy is implicated in the regulation of hypothalamic RNA methylation and risk of obesity in offspring
A Kaspi, I Khurana, M Ziemann, T Connor, B Spolding, P Zimmet, ...
Molecular nutrition & food research 62 (14), 1800134, 2018
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