|The genetic evolution of melanoma from precursor lesions|
AH Shain, I Yeh, I Kovalyshyn, A Sriharan, E Talevich, A Gagnon, ...
New England Journal of Medicine 373 (20), 1926-1936, 2015
|CNVkit: genome-wide copy number detection and visualization from targeted DNA sequencing|
E Talevich, AH Shain, T Botton, BC Bastian
PLoS computational biology 12 (4), 2016
|Exome sequencing of desmoplastic melanoma identifies recurrent NFKBIE promoter mutations and diverse activating mutations in the MAPK pathway|
AH Shain, M Garrido, T Botton, E Talevich, I Yeh, JZ Sanborn, J Chung, ...
Nature genetics 47 (10), 1194, 2015
|Activating MET kinase rearrangements in melanoma and Spitz tumours|
I Yeh, T Botton, E Talevich, AH Shain, AJ Sparatta, A de La Fouchardiere, ...
Nature communications 6 (1), 1-9, 2015
|Global Analysis of Protein Expression and Phosphorylation of Three Stages of Plasmodium falciparum Intraerythrocytic Development|
BN Pease, EL Huttlin, MP Jedrychowski, E Talevich, J Harmon, T Dillman, ...
Journal of proteome research 12 (9), 4028-4045, 2013
|Targeted next-generation sequencing of pediatric neuro-oncology patients improves diagnosis, identifies pathogenic germline mutations, and directs targeted therapy|
CN Kline, NM Joseph, JP Grenert, J van Ziffle, E Talevich, C Onodera, ...
Neuro-oncology 19 (5), 699-709, 2017
|Bio. Phylo: a unified toolkit for processing, analyzing and visualizing phylogenetic trees in Biopython|
E Talevich, BM Invergo, PJA Cock, BA Chapman
BMC bioinformatics 13 (1), 209, 2012
|Structural and evolutionary divergence of eukaryotic protein kinases in Apicomplexa|
E Talevich, A Mirza, N Kannan
BMC evolutionary biology 11 (1), 321, 2011
|Structural and evolutionary adaptation of rhoptry kinases and pseudokinases, a family of coccidian virulence factors|
E Talevich, N Kannan
BMC evolutionary biology 13 (1), 117, 2013
|An evolutionary perspective on the kinome of malaria parasites|
E Talevich, AB Tobin, N Kannan, C Doerig
Philosophical Transactions of the Royal Society B: Biological Sciences 367 …, 2012
|Genomic profiling of malignant peritoneal mesothelioma reveals recurrent alterations in epigenetic regulatory genes BAP1, SETD2, and DDX3X|
NM Joseph, YY Chen, A Nasr, I Yeh, E Talevich, C Onodera, BC Bastian, ...
Modern Pathology 30 (2), 246-254, 2017
|ProKinO: a unified resource for mining the cancer kinome|
DI McSkimming, S Dastgheib, E Talevich, A Narayanan, S Katiyar, ...
Human mutation 36 (2), 175-186, 2015
|Genomic profiling of malignant phyllodes tumors reveals aberrations in FGFR1 and PI-3 kinase/RAS signaling pathways and provides insights into intratumoral heterogeneity|
SY Liu, NM Joseph, A Ravindranathan, BA Stohr, NY Greenland, P Vohra, ...
Modern Pathology 29 (9), 1012-1027, 2016
|A recurrent kinase domain mutation in PRKCA defines chordoid glioma of the third ventricle|
B Goode, G Mondal, M Hyun, DG Ruiz, YH Lin, J Van Ziffle, NM Joseph, ...
Nature communications 9 (1), 810, 2018
|Adenomatoid tumors of the male and female genital tract are defined by TRAF7 mutations that drive aberrant NF-kB pathway activation|
B Goode, NM Joseph, M Stevers, J Van Ziffle, C Onodera, E Talevich, ...
Modern Pathology 31 (4), 660-673, 2018
|The genetic evolution of melanoma|
AH Shain, R Yu, I Yeh, J Benhamida, I Kovalyshyn, A Sriharan, E Talevich, ...
Cancer Research 76 (14 Supplement), 2372-2372, 2016
|Genomic profiling of breast secretory carcinomas reveals distinct genetics from other breast cancers and similarity to mammary analog secretory carcinomas|
G Krings, NM Joseph, GR Bean, D Solomon, C Onodera, E Talevich, ...
Modern Pathology 30 (8), 1086-1099, 2017
|Prediction and prioritization of rare oncogenic mutations in the cancer Kinome using novel features and multiple classifiers|
U ManChon, E Talevich, S Katiyar, K Rasheed, N Kannan
PLoS computational biology 10 (4), 2014
|Genomic profiling of combined hepatocellular‐cholangiocarcinoma reveals similar genetics to hepatocellular carcinoma|
NM Joseph, CG Tsokos, SE Umetsu, AH Shain, RK Kelley, C Onodera, ...
The Journal of pathology 248 (2), 164-178, 2019
|Gene copy number estimation from targeted next-generation sequencing of prostate cancer biopsies: analytic validation and clinical qualification|
G Seed, W Yuan, J Mateo, S Carreira, C Bertan, M Lambros, G Boysen, ...
Clinical Cancer Research 23 (20), 6070-6077, 2017