Pedro Mendes

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Medförfattare

Douglas KellUniversity of LiverpoolVerifierad e-postadress på liv.ac.uk
Kieran SmallboneMCISB / Mathematics / Computer Science, University of ManchesterVerifierad e-postadress på manchester.ac.uk
Lloyd W. SumnerUniversity of Missouri, Biochemistry Dept, Christopher S. Bond Life Sciences Center, MU MetabolomicsVerifierad e-postadress på missouri.edu
Stefan HoopsResearch Associate Professor, Biocomplexity Institute & Initiative, University of VirginiaVerifierad e-postadress på virginia.edu
Alberto de la FuenteQatar Biomedical Research InstituteVerifierad e-postadress på hbku.edu.qa
Jürgen PahleIndependent Group Leader, Heidelberg University, GermanyVerifierad e-postadress på bioquant.uni-heidelberg.de
Neil SwainstonUniversity of LiverpoolVerifierad e-postadress på liverpool.ac.uk
Richard DixonDistinguished Professor of Biology, University of North TexasVerifierad e-postadress på unt.edu
Hans WesterhoffUniversity of Amsterdam, VU University Amsterdam, University of ManchesterVerifierad e-postadress på manchester.ac.uk
Julio R. BangaResearch Professor, IIM-CSIC, Vigo (Spain)Verifierad e-postadress på csic.es
Joseph Olufemi DadaProfessor of Electrical Engineering, Afe Babalola University, Ado-EkitiVerifierad e-postadress på abuad.edu.ng
Oliver FiehnUC DavisVerifierad e-postadress på ucdavis.edu
Snoep JLStellenbosch University; Manchester University; Vrije Universiteit AmsterdamVerifierad e-postadress på sun.ac.za
Vladimir ShulaevProfessor, University of North TexasVerifierad e-postadress på unt.edu
Norman W. PatonProfessor of Computer Science, University of ManchesterVerifierad e-postadress på cs.man.ac.uk
Vangelis SimeonidisProgram Manager, Lumen BioscienceVerifierad e-postadress på lumen.bio
Warwick DunnUniversity of Birmingham, UKVerifierad e-postadress på bham.ac.uk
Paul DobsonScruffy Biotech LtdVerifierad e-postadress på manchester.ac.uk
Naglis MalysSenior Research Fellow, University of NottinghamVerifierad e-postadress på nottingham.ac.uk
Kazuki SaitoDirector, RIKEN CSRS; Director, Plant Mol Sci Ctr, Chiba UnivVerifierad e-postadress på faculty.chiba-u.jp

Pedro Mendes

University of Connecticut

Verifierad e-postadress på uchc.edu - Startsida

systems biology bioinformatics computational biology modeling simulation


Titel Sortera efter citat Sortera efter år Sortera efter titel	Citeras av Citeras av	År
The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models M Hucka, A Finney, HM Sauro, H Bolouri, JC Doyle, H Kitano, AP Arkin, ... Bioinformatics 19 (4), 524-531, 2003	3347	2003
COPASI—a complex pathway simulator S Hoops, S Sahle, R Gauges, C Lee, J Pahle, N Simus, M Singhal, L Xu, ... Bioinformatics 22 (24), 3067-3074, 2006	2316	2006
Plant metabolomics: large-scale phytochemistry in the functional genomics era LW Sumner, P Mendes, RA Dixon Phytochemistry 62 (6), 817-836, 2003	1207	2003
Parameter estimation in biochemical pathways: a comparison of global optimization methods CG Moles, P Mendes, JR Banga Genome research 13 (11), 2467-2474, 2003	1019	2003
A community-driven global reconstruction of human metabolism I Thiele, N Swainston, RMT Fleming, A Hoppe, S Sahoo, MK Aurich, ... Nature biotechnology 31 (5), 419-425, 2013	954	2013
GEPASI: a software package for modelling the dynamics, steady states and control of biochemical and other systems P Mendes Bioinformatics 9 (5), 563-571, 1993	851	1993
Non-linear optimization of biochemical pathways: applications to metabolic engineering and parameter estimation. P Mendes, D Kell Bioinformatics (Oxford, England) 14 (10), 869-883, 1998	829	1998
Potential of metabolomics as a functional genomics tool RJ Bino, RD Hall, O Fiehn, J Kopka, K Saito, J Draper, BJ Nikolau, ... Trends in plant science 9 (9), 418-425, 2004	805	2004
Biochemistry by numbers: simulation of biochemical pathways with Gepasi 3 P Mendes Trends in biochemical sciences 22 (9), 361-363, 1997	739	1997
A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology MJ Herrgård, N Swainston, P Dobson, WB Dunn, KY Arga, M Arvas, ... Nature biotechnology 26 (10), 1155-1160, 2008	608	2008
Minimum information requested in the annotation of biochemical models (MIRIAM) N Le Novère, A Finney, M Hucka, US Bhalla, F Campagne, ... Nature biotechnology 23 (12), 1509-1515, 2005	604	2005
Discovery of meaningful associations in genomic data using partial correlation coefficients A De La Fuente, N Bing, I Hoeschele, P Mendes Bioinformatics 20 (18), 3565-3574, 2004	590	2004
Myo-inositol oxygenase offers a possible entry point into plant ascorbate biosynthesis A Lorence, BI Chevone, P Mendes, CL Nessler Plant Physiology 134 (3), 1200-1205, 2004	405	2004
Metabolic profiling of Medicago truncatula cell cultures reveals the effects of biotic and abiotic elicitors on metabolism CD Broeckling, DV Huhman, MA Farag, JT Smith, GD May, P Mendes, ... Journal of experimental botany 56 (410), 323-336, 2005	387	2005
A hybrid approach for efficient and robust parameter estimation in biochemical pathways M Rodriguez-Fernandez, P Mendes, JR Banga Biosystems 83 (2-3), 248-265, 2006	369	2006
Gene networks: how to put the function in genomics P Brazhnik, A de la Fuente, P Mendes TRENDS in Biotechnology 20 (11), 467-472, 2002	353	2002
ChEBI in 2016: Improved services and an expanding collection of metabolites J Hastings, G Owen, A Dekker, M Ennis, N Kale, V Muthukrishnan, ... Nucleic acids research 44 (D1), D1214-D1219, 2016	344	2016
The metabolomics standards initiative (MSI) O Fiehn, D Robertson, J Griffin, M van der Werf, B Nikolau, N Morrison, ... Metabolomics 3 (3), 175-178, 2007	323	2007
A proposed framework for the description of plant metabolomics experiments and their results H Jenkins, N Hardy, M Beckmann, J Draper, AR Smith, J Taylor, O Fiehn, ... Nature biotechnology 22 (12), 1601-1606, 2004	308	2004
Artificial gene networks for objective comparison of analysis algorithms P Mendes, W Sha, K Ye Bioinformatics 19 (suppl_2), ii122-ii129, 2003	274	2003

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