Devin P Sullivan
Devin P Sullivan
KTH Royal Institute of Technology
Verified email at scilifelab.se - Homepage
Title
Cited by
Cited by
Year
A subcellular map of the human proteome
PJ Thul, L ┼kesson, M Wiking, D Mahdessian, A Geladaki, HA Blal, T Alm, ...
Science 356 (6340), 2017
7362017
Deep learning is combined with massive-scale citizen science to improve large-scale image classification
DP Sullivan, CF Winsnes, L ┼kesson, M Hjelmare, M Wiking, R Schutten, ...
Nature biotechnology 36 (9), 820-828, 2018
502018
Joint modeling of cell and nuclear shape variation
GR Johnson, TE Buck, DP Sullivan, GK Rohde, RF Murphy
Molecular biology of the cell 26 (22), 4046-4056, 2015
312015
Active machine learning-driven experimentation to determine compound effects on protein patterns
AW Naik, JD Kangas, DP Sullivan, RF Murphy
Elife 5, e10047, 2016
252016
Unbiased rare event sampling in spatial stochastic systems biology models using a weighted ensemble of trajectories
RM Donovan, JJ Tapia, DP Sullivan, JR Faeder, RF Murphy, M Dittrich, ...
PLoS computational biology 12 (2), e1004611, 2016
222016
The human secretome
M UhlÚn, MJ Karlsson, A Hober, AS Svensson, J Scheffel, D Kotol, ...
Science signaling 12 (609), 2019
122019
A subcellular map of the human proteome. Science 356: eaal3321
PJ Thul, L ┼kesson, M Wiking, D Mahdessian, A Geladaki, H Ait Blal, ...
112017
Vitamin D-deficient mice have more invasive urinary tract infection
O Hertting, P LŘthje, D Sullivan, P Aspenstr÷m, A Brauner
PloS one 12 (7), e0180810, 2017
62017
Design automation for biological models: a pipeline that incorporates spatial and molecular complexity
DP Sullivan, R Arepally, RF Murphy, JJ Tapia, JR Faeder, M Dittrich, ...
Proceedings of the 25th edition on Great Lakes Symposium on VLSI, 321-323, 2015
62015
Seeing more: A future of augmented microscopy
DP Sullivan, E Lundberg
Cell 173 (3), 546-548, 2018
52018
Analysis of the Human Protein Atlas Image Classification competition
W Ouyang, CF Winsnes, M Hjelmare, AJ Cesnik, L ┼kesson, H Xu, ...
Nature methods 16 (12), 1254-1261, 2019
42019
Multi-label prediction of subcellular localization in confocal images using deep neural networks
CF Winsnes, DP Sullivan, K Smith, E Lundberg
Molecular Biology of the Cell 27, 2016
22016
Spatiotemporal dissection of the cell cycle regulated human proteome
D Mahdessian, D Sullivan, F Danielsson, M Arif, C Zhang, L ┼kesson, ...
BioRxiv, 543231, 2019
12019
Transcriptome profiling of the interconnection of pathways involved in malignant transformation and response to hypoxia
F Danielsson, E Fasterius, D Sullivan, L Hases, K Sanli, C Zhang, ...
Oncotarget 9 (28), 19730, 2018
12018
Image-derived generative modeling of complex cellular organization in both space and time
DP Sullivan, JR Faeder, GK Rhode, I Sbalzarini
PhD thesis CMU-CB-15-102, Carnegie Mellon University, Pittsburgh, PA, 2015
12015
Spatial processes
JC Schaff, A Lakshminarayana, LP Smith, F Bergmann, DP Sullivan, ...
Technical Report, 2013
12013
Spatial characterization of the human centrosome proteome opens up new horizons for a small but versatile organelle
F Danielsson, D Mahdessian, U Axelsson, D Sullivan, M UhlÚn, ...
Proteomics, 1900361, 2020
2020
Publisher Correction: Analysis of the Human Protein Atlas Image Classification competition
W Ouyang, CF Winsnes, M Hjelmare, AJ Cesnik, L ┼kesson, H Xu, ...
Nature methods 17 (2), 241-241, 2020
2020
Analysis of the Human Protein Atlas Image Classification competition (vol 54, pg 2112, 2019)
W Ouyang, CF Winsnes, M Hjelmare, AJ Cesnik, L Akesson, H Xu, ...
NATURE METHODS, 2020
2020
Spatiotemporal dissection of the cell cycle with single-cell proteogenomics
D Mahdessian, AJ Cesnik, C Gnann, F Danielsson, L Akesson, M Arif, ...
bioRxiv, 543231, 2020
2020
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Articles 1–20