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Narendar Kolimi
Narendar Kolimi
UMass Chan Medical School, Worcester, MA
Verified email at umassmed.edu
Title
Cited by
Cited by
Year
3D-NuS: a web server for automated modeling and visualization of non-canonical 3-dimensional nucleic acid structures
LPP Patro, A Kumar, N Kolimi, T Rathinavelan
Journal of molecular biology 429 (16), 2438-2448, 2017
462017
Specific conformational dynamics and expansion underpin a multi-step mechanism for specific binding of p27 with Cdk2/Cyclin A
M Tsytlonok, K Hemmen, G Hamilton, N Kolimi, S Felekyan, CAM Seidel, ...
Journal of molecular biology 432 (9), 2998-3017, 2020
312020
Twisting right to left: A… A mismatch in a CAG trinucleotide repeat overexpansion provokes left-handed Z-DNA conformation
N Khan, N Kolimi, T Rathinavelan
PLoS Computational Biology 11 (4), e1004162, 2015
262015
Secondary structural choice of DNA and RNA associated with CGG/CCG trinucleotide repeat expansion rationalizes the RNA misprocessing in FXTAS
Y Ajjugal, N Kolimi, T Rathinavelan
Scientific Reports 11 (1), 8163, 2021
192021
Out-of-equilibrium biophysical chemistry: the case for multidimensional, integrated single-molecule approaches
N Kolimi, A Pabbathi, N Saikia, F Ding, H Sanabria, J Alper
The Journal of Physical Chemistry B 125 (37), 10404-10418, 2021
142021
AB–Z junction induced by an A… A mismatch in GAC repeats in the gene for cartilage oligomeric matrix protein promotes binding with the hZαADAR1 protein
N Kolimi, Y Ajjugal, T Rathinavelan
Journal of Biological Chemistry 292 (46), 18732-18746, 2017
82017
Key diffusion mechanisms involved in regulating bidirectional water permeation across E. coli outer membrane lectin
S Sachdeva, N Kolimi, SA Nair, T Rathinavelan
Scientific Reports 6 (1), 28157, 2016
82016
Domain tethering impacts dimerization and DNA-mediated allostery in the human transcription factor FoxP1
P Cruz, N Paredes, I Asela, N Kolimi, JA Molina, CA Ramírez-Sarmiento, ...
The Journal of Chemical Physics 158 (19), 2023
12023
DNA controls the dimerization of the human FoxP1 forkhead domain
N Kolimi, J Ballard, T Peulen, R Goutam, FX Duffy, CA Ramírez-Sarmiento, ...
Cell Reports Physical Science 5 (3), 2024
2024
DNA-induces intra-and inter-molecular changes in dimerization of the human FOXP1
N Kolimi, TOO Peulen, JH Ballard, JAM Ramirez, CA Ramirez-Sarmiento, ...
Biophysical Journal 122 (3), 430a, 2023
2023
Integrative structural dynamics of calmodulin showcases sequence-to-function
N Kolimi, A Krishnamohan, R Goutam, F Morcos, H Sanabria
Biophysical Journal 121 (3), 43a, 2022
2022
Secondary structural choice of DNA and RNA associated with CGG/CCG trinucleotide repeat expansion rationalizes the RNA misprocessing in FXTAS
T Rathinavelan, Y Ajjugal, N Kolimi
Nature Research, 2021
2021
Ensemble Switching of the DNA-Binding Domain of Human FoxP1
N Kolimi, E Medina, C Ramírez-Sarmiento, H Sanabria, J Babul
Biophysical Journal 120 (3), 18a, 2021
2021
Sequence and Structure Based Approach for Automated FRET Network Design
GL Hamilton, H Sanabria, F Morcos, N Kolimi, A Krishnamohan
Biophysical Journal 120 (3), 188a, 2021
2021
Expansion Upon Binding Guides p27 Binding to Cdk2/cyclinA
M Tsytlonok, K Hemmen, GL Hamilton, N Kolimi, S Felekyan, CA Seidel, ...
Biophysical Journal 118 (3), 371a, 2020
2020
Integrated Structural Dynamics of Calmodulin
N Kolimi
Biophysical Journal 118 (3), 40a, 2020
2020
New structural insights into unusual nucleic acid conformations in relevance to mechanisms and pathogeneses of trinucleotide repeat expansion disorders
N Kolimi, T Rathinavelan
Indian Institute of Technology Hyderabad, 2018
2018
A BZ junction induced by an A... A mismatch in GAC repeats in the gene for cartilage oligomeric matrix protein promotes binding with the HzαADAR1protei
T Rathinavelan, Y Ajjugal, N Kolimi
American Society for Biochemistry and Molecular Biology Inc., 2017
2017
3D-NuS: A Web Server for Automated Modeling and Visualization of Non-Canonical 3-Dimensional Nucleic Acid Structures
T Rathinavelan, LPP Patro, A Kumar, N Kolimi
Academic Press, 2017
2017
Key diffusion mechanisms involved in regulating bidirectional water permeation across E. coli outer membrane lectin
T Rathinavelan, SA Nair, N Kolimi, S Sachdeva
Nature Publishing Group, 2016
2016
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