Ola Spjuth
Ola Spjuth
Professor at Department of Pharmaceutical Biosciences, Uppsala University
Verified email at farmbio.uu.se - Homepage
Cited by
Cited by
The Chemistry Development Kit (CDK) v2. 0: atom typing, depiction, molecular formulas, and substructure searching
EL Willighagen, JW Mayfield, J Alvarsson, A Berg, L Carlsson, ...
Journal of cheminformatics 9 (1), 1-19, 2017
Bioclipse: an open source workbench for chemo-and bioinformatics
O Spjuth, T Helmus, EL Willighagen, S Kuhn, M Eklund, J Wagener, ...
BMC bioinformatics 8 (1), 1-10, 2007
The ChEMBL database as linked open data
EL Willighagen, A Waagmeester, O Spjuth, P Ansell, AJ Williams, ...
Journal of cheminformatics 5 (1), 1-12, 2013
Deep learning in image cytometry: a review
A Gupta, PJ Harrison, H Wieslander, N Pielawski, K Kartasalo, G Partel, ...
Cytometry Part A 95 (4), 366-380, 2019
Use of historic metabolic biotransformation data as a means of anticipating metabolic sites using MetaPrint2D and Bioclipse
L Carlsson, O Spjuth, S Adams, RC Glen, S Boyer
BMC bioinformatics 11 (1), 1-7, 2010
Proteochemometric modeling of HIV protease susceptibility
M Lapins, M Eklund, O Spjuth, P Prusis, JES Wikberg
BMC bioinformatics 9 (1), 1-11, 2008
Open data, open source and open standards in chemistry: the Blue Obelisk five years on
NM O'Boyle, R Guha, EL Willighagen, SE Adams, J Alvarsson, JC Bradley, ...
Journal of cheminformatics 3 (1), 1-15, 2011
Bioclipse 2: A scriptable integration platform for the life sciences
O Spjuth, J Alvarsson, A Berg, M Eklund, S Kuhn, C Mäsak, G Torrance, ...
BMC bioinformatics 10 (1), 1-5, 2009
Lessons learned from implementing a national infrastructure in Sweden for storage and analysis of next-generation sequencing data
S Lampa, M Dahlö, PI Olason, J Hagberg, O Spjuth
Gigascience 2 (1), 2047-217X-2-9, 2013
XMPP for cloud computing in bioinformatics supporting discovery and invocation of asynchronous web services
J Wagener, O Spjuth, EL Willighagen, JES Wikberg
BMC bioinformatics 10 (1), 1-12, 2009
Experiences with workflows for automating data-intensive bioinformatics
O Spjuth, E Bongcam-Rudloff, GC Hernández, L Forer, M Giovacchini, ...
Biology direct 10 (1), 1-12, 2015
Transfer learning with deep convolutional neural networks for classifying cellular morphological changes
A Kensert, PJ Harrison, O Spjuth
SLAS Discovery: Advancing Life Sciences R&D 24 (4), 466-475, 2019
WhichCyp: prediction of cytochromes P450 inhibition
M Rostkowski, O Spjuth, P Rydberg
Bioinformatics 29 (16), 2051-2052, 2013
The LCB data warehouse
A Ameur, V Yankovski, S Enroth, O Spjuth, J Komorowski
Bioinformatics 22 (8), 1024-1026, 2006
Ligand-based target prediction with signature fingerprints
J Alvarsson, M Eklund, O Engkvist, O Spjuth, L Carlsson, JES Wikberg, ...
Journal of chemical information and modeling 54 (10), 2647-2653, 2014
A unified proteochemometric model for prediction of inhibition of cytochrome P450 isoforms
M Lapins, A Worachartcheewan, O Spjuth, V Georgiev, V Prachayasittikul, ...
PLoS One 8 (6), e66566, 2013
Towards interoperable and reproducible QSAR analyses: Exchange of datasets
O Spjuth, EL Willighagen, R Guha, M Eklund, JES Wikberg
Journal of cheminformatics 2 (1), 1-7, 2010
PhenoMeNal: processing and analysis of metabolomics data in the cloud
K Peters, J Bradbury, S Bergmann, M Capuccini, M Cascante, P de Atauri, ...
Gigascience 8 (2), giy149, 2019
Toxicology ontology perspectives
B Hardy, G Apic, P Carthew, D Clark, D Cook, I Dix, S Escher, J Hastings, ...
ALTEX-Alternatives to animal experimentation 29 (2), 139-156, 2012
Linking the resource description framework to cheminformatics and proteochemometrics
EL Willighagen, J Alvarsson, A Andersson, M Eklund, S Lampa, M Lapins, ...
Journal of biomedical semantics 2 (1), 1-24, 2011
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