Ola Spjuth

Cited by

	All	Since 2015
Citations	2086	1522
h-index	26	21
i10-index	57	50

380

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285

2007200820092010201120122013201420152016201720182019202011 28 37 44 86 101 105 136 149 158 201 249 380 379

Co-authors

Egon WillighagenAssistant Professor at BiGCaT, NUTRIM, Maastricht University The Netherlands, ORCID:0000-0001-7542Verified email at maastrichtuniversity.nl
Jonathan AlvarssonUppsala UniversityVerified email at farmbio.uu.se
Lars CarlssonStena Line and CLRC University of LondonVerified email at stenaline.com
Samuel LampaIndependent researcher and R&D Consultant at Savantic ABVerified email at savantic.se
Nina JeliazkovaIdeaconsult Ltd.Verified email at ideaconsult.net
Christoph SteinbeckFriedrich-Schiller-University JenaVerified email at uni-jena.de
Marco CapucciniRIKEN Center for Computational ScienceVerified email at alum.riken.jp
Martin DahlöUppsala UniversityVerified email at scilifelab.uu.se
Johannes WagenerInstitut für Hygiene und Mikrobiologie, Universität Würzburg, Würzburg, GermanyVerified email at hygiene.uni-wuerzburg.de
Kim KultimaVerified email at medsci.uu.se
Rajarshi GuhaVertex PharmaceuticalsVerified email at vrtx.com
Payam Emami KhoonsariNational bioinformatics infrastructure SwedenVerified email at scilifelab.se
Salman ToorUppsala University, UPPMAX, SNIC, ScaleoutSystemsVerified email at it.uu.se
Janna HastingsUCL, OvGU Magdeburg, EPFLVerified email at ucl.ac.uk
Sam AdamsUniversity of CambridgeVerified email at cam.ac.uk
Erwin LaureVerified email at mpcdf.mpg.de
Chris EveloHead Department of Bioinformatics - BiGCaT, Maastricht University ORCID:0000-0002-5301-3142Verified email at maastrichtuniversity.nl
gilleain torranceResearcherVerified email at ebi.ac.uk
Valentin GeorgievBioinformatics expert at NBIS, Uppsala UniversityVerified email at icm.uu.se
Chanin NantasenamatAssociate Professor of Medical Technology, Mahidol UniversityVerified email at mahidol.edu

Ola Spjuth

Department of Pharmaceutical Biosciences, Uppsala University

Verified email at farmbio.uu.se - Homepage

drug discovery AI machine learning cell profiling predictive toxicology


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The Chemistry Development Kit (CDK) v2. 0: atom typing, depiction, molecular formulas, and substructure searching EL Willighagen, JW Mayfield, J Alvarsson, A Berg, L Carlsson, ... Journal of cheminformatics 9 (1), 33, 2017	164	2017
Bioclipse: an open source workbench for chemo-and bioinformatics O Spjuth, T Helmus, EL Willighagen, S Kuhn, M Eklund, J Wagener, ... BMC bioinformatics 8 (1), 1-10, 2007	132	2007
The ChEMBL database as linked open data EL Willighagen, A Waagmeester, O Spjuth, P Ansell, AJ Williams, ... Journal of cheminformatics 5 (1), 1-12, 2013	101	2013
Use of historic metabolic biotransformation data as a means of anticipating metabolic sites using MetaPrint2D and Bioclipse L Carlsson, O Spjuth, S Adams, RC Glen, S Boyer BMC bioinformatics 11 (1), 362, 2010	81	2010
Proteochemometric modeling of HIV protease susceptibility M Lapins, M Eklund, O Spjuth, P Prusis, JES Wikberg BMC bioinformatics 9 (1), 181, 2008	77	2008
Open data, open source and open standards in chemistry: the Blue Obelisk five years on NM O'Boyle, R Guha, EL Willighagen, SE Adams, J Alvarsson, JC Bradley, ... Journal of cheminformatics 3 (1), 37, 2011	74	2011
Bioclipse 2: A scriptable integration platform for the life sciences O Spjuth, J Alvarsson, A Berg, M Eklund, S Kuhn, C Mäsak, G Torrance, ... BMC bioinformatics 10 (1), 1-5, 2009	65	2009
Lessons learned from implementing a national infrastructure in Sweden for storage and analysis of next-generation sequencing data S Lampa, M Dahlö, PI Olason, J Hagberg, O Spjuth Gigascience 2 (1), 2047-217X-2-9, 2013	64	2013
XMPP for cloud computing in bioinformatics supporting discovery and invocation of asynchronous web services J Wagener, O Spjuth, EL Willighagen, JES Wikberg BMC bioinformatics 10 (1), 279, 2009	64	2009
Deep learning in image cytometry: a review A Gupta, PJ Harrison, H Wieslander, N Pielawski, K Kartasalo, G Partel, ... Cytometry Part A 95 (4), 366-380, 2019	61	2019
Experiences with workflows for automating data-intensive bioinformatics O Spjuth, E Bongcam-Rudloff, GC Hernández, L Forer, M Giovacchini, ... Biology direct 10 (1), 1-12, 2015	55	2015
The LCB data warehouse A Ameur, V Yankovski, S Enroth, O Spjuth, J Komorowski Bioinformatics 22 (8), 1024-1026, 2006	50	2006
WhichCyp: prediction of cytochromes P450 inhibition M Rostkowski, O Spjuth, P Rydberg Bioinformatics 29 (16), 2051-2052, 2013	44	2013
Transfer learning with deep convolutional neural networks for classifying cellular morphological changes A Kensert, PJ Harrison, O Spjuth SLAS DISCOVERY: Advancing Life Sciences R&D 24 (4), 466-475, 2019	42	2019
A unified proteochemometric model for prediction of inhibition of cytochrome P450 isoforms M Lapins, A Worachartcheewan, O Spjuth, V Georgiev, V Prachayasittikul, ... PLoS One 8 (6), e66566, 2013	42	2013
Towards interoperable and reproducible QSAR analyses: Exchange of datasets O Spjuth, EL Willighagen, R Guha, M Eklund, JES Wikberg Journal of cheminformatics 2 (1), 1-7, 2010	42	2010
Toxicology ontology perspectives B Hardy, G Apic, P Carthew, D Clark, D Cook, I Dix, S Escher, J Hastings, ... ALTEX-Alternatives to animal experimentation 29 (2), 139-156, 2012	38	2012
Ligand-based target prediction with signature fingerprints J Alvarsson, M Eklund, O Engkvist, O Spjuth, L Carlsson, JES Wikberg, ... Journal of chemical information and modeling 54 (10), 2647-2653, 2014	37	2014
Linking the resource description framework to cheminformatics and proteochemometrics EL Willighagen, J Alvarsson, A Andersson, M Eklund, S Lampa, M Lapins, ... Journal of biomedical semantics 2 (S1), S6, 2011	33	2011
PhenoMeNal: processing and analysis of metabolomics data in the cloud K Peters, J Bradbury, S Bergmann, M Capuccini, M Cascante, P de Atauri, ... Gigascience 8 (2), giy149, 2019	32	2019

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