| Gene expression across mammalian organ development M Cardoso-Moreira, J Halbert, D Valloton, B Velten, C Chen, Y Shao, ... Nature 571 (7766), 505-509, 2019 | 593 | 2019 |
| Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication M Carneiro, CJ Rubin, F Di Palma, FW Albert, J Alföldi, AM Barrio, ... Science 345 (6200), 1074-1079, 2014 | 426 | 2014 |
| Genetic basis for red coloration in birds RJ Lopes, JD Johnson, MB Toomey, MS Ferreira, PM Araujo, ... Current Biology 26 (11), 1427-1434, 2016 | 248 | 2016 |
| Reference-free population genomics from next-generation transcriptome data and the vertebrate–invertebrate gap P Gayral, J Melo-Ferreira, S Glemin, N Bierne, M Carneiro, B Nabholz, ... PLoS genetics 9 (4), e1003457, 2013 | 190 | 2013 |
| Regulatory changes in pterin and carotenoid genes underlie balanced color polymorphisms in the wall lizard P Andrade, C Pinho, G Pérez i de Lanuza, S Afonso, J Brejcha, CJ Rubin, ... Proceedings of the National Academy of Sciences 116 (12), 5633-5642, 2019 | 189 | 2019 |
| The genetic structure of domestic rabbits M Carneiro, S Afonso, A Geraldes, H Garreau, G Bolet, S Boucher, ... Molecular Biology and Evolution 28 (6), 1801-1816, 2011 | 179 | 2011 |
| Parallel adaptation of rabbit populations to myxoma virus JM Alves, M Carneiro, JY Cheng, A Lemos de Matos, MM Rahman, ... Science 363 (6433), 1319-1326, 2019 | 157 | 2019 |
| A comparison of brain gene expression levels in domesticated and wild animals FW Albert, M Somel, M Carneiro, A Aximu-Petri, M Halbwax, O Thalmann, ... PLoS Genetics 8 (9), e1002962, 2012 | 152 | 2012 |
| High-density lipoprotein receptor SCARB1 is required for carotenoid coloration in birds MB Toomey, RJ Lopes, PM Araújo, JD Johnson, MA Gazda, S Afonso, ... Proceedings of the National Academy of Sciences 114 (20), 5219-5224, 2017 | 133 | 2017 |
| Recurrent Introgression of Mitochondrial DNA Among Hares (Lepus spp.) Revealed by Species-Tree Inference and Coalescent Simulations J Melo-Ferreira, P Boursot, M Carneiro, PJ Esteves, L Farelo, PC Alves Systematic Biology 61 (3), 367-381, 2012 | 133 | 2012 |
| Recombination and speciation: loci near centromeres are more differentiated than loci near telomeres between subspecies of the European rabbit (Oryctolagus cuniculus) M Carneiro, N Ferrand, MW Nachman Genetics 181 (2), 593-606, 2009 | 132 | 2009 |
| The genomic architecture of population divergence between subspecies of the European rabbit M Carneiro, FW Albert, S Afonso, RJ Pereira, H Burbano, R Campos, ... PLoS Genetics 10 (8), e1003519, 2014 | 103 | 2014 |
| Elevated proportions of deleterious genetic variation in domestic animals and plants T Makino, CJ Rubin, M Carneiro, E Axelsson, L Andersson, MT Webster Genome Biology and Evolution 10 (1), 276-290, 2018 | 100 | 2018 |
| Evidence for widespread positive and purifying selection across the European rabbit (Oryctolagus cuniculus) genome M Carneiro, FW Albert, J Melo-Ferreira, N Galtier, P Gayral, ... Molecular Biology and Evolution 29 (7), 1837-1849, 2012 | 91 | 2012 |
| SPECIATION IN THE EUROPEAN RABBIT (ORYCTOLAGUS CUNICULUS): ISLANDS OF DIFFERENTIATION ON THE X CHROMOSOME AND AUTOSOMES M Carneiro, JA Blanco-Aguiar, R Villafuerte, N Ferrand, MW Nachman Evolution 64 (12), 3443-3460, 2010 | 87 | 2010 |
| A genetic mechanism for sexual dichromatism in birds MA Gazda, PM Araújo, RJ Lopes, MB Toomey, P Andrade, S Afonso, ... Science 368 (6496), 1270-1274, 2020 | 84 | 2020 |
| Draft genome assembly of the invasive cane toad, Rhinella marina RJ Edwards, DE Tuipulotu, TG Amos, D O'Meally, MF Richardson, ... Gigascience 7 (9), giy095, 2018 | 82 | 2018 |
| Changes in brain architecture are consistent with altered fear processing in domestic rabbits I Brusini, M Carneiro, C Wang, CJ Rubin, H Ring, S Afonso, ... Proceedings of the National Academy of Sciences 115 (28), 7380-7385, 2018 | 73 | 2018 |
| Levels and patterns of genetic diversity and population structure in domestic rabbits JM Alves, M Carneiro, S Afonso, S Lopes, H Garreau, S Boucher, D Allain, ... PLoS one 10 (12), e0144687, 2015 | 70 | 2015 |
| Identifying Loci Under Selection Against Gene Flow in Isolation with Migration Models VMC Sousa, M Carneiro, N Ferrand, J Hey Genetics 194, 211-233, 2013 | 68 | 2013 |
