| Putting the pieces together: integrative modeling platform software for structure determination of macromolecular assemblies D Russel, K Lasker, B Webb, J Velázquez-Muriel, E Tjioe, ... PLoS biology 10 (1), e1001244, 2012 | 533 | 2012 |
| Simple rules for passive diffusion through the nuclear pore complex BL Timney, B Raveh, R Mironska, JM Trivedi, SJ Kim, D Russel, ... Journal of Cell Biology 215 (1), 57-76, 2016 | 418 | 2016 |
| The structural dynamics of macromolecular processes D Russel, K Lasker, J Phillips, D Schneidman-Duhovny, ... Current opinion in cell biology 21 (1), 97-108, 2009 | 91 | 2009 |
| Integrative structure modeling of macromolecular assemblies from proteomics data K Lasker, JL Phillips, D Russel, J Velazquez-Muriel, ... Molecular & Cellular Proteomics 9 (8), 1689-1702, 2010 | 85 | 2010 |
| An empirical comparison of techniques for updating Delaunay triangulations L Guibas, D Russel Proceedings of the twentieth annual symposium on Computational geometry, 170-179, 2004 | 74 | 2004 |
| Collision detection for deforming necklaces L Guibas, A Nguyen, D Russel, L Zhang Proceedings of the eighteenth annual symposium on Computational geometry, 33-42, 2002 | 64 | 2002 |
| Collision detection for deforming necklaces P Agarwal, L Guibas, A Nguyen, D Russel, L Zhang Computational Geometry 28 (2-3), 137-163, 2004 | 53 | 2004 |
| Assembly of macromolecular complexes by satisfaction of spatial restraints from electron microscopy images J Velázquez-Muriel, K Lasker, D Russel, J Phillips, BM Webb, ... Proceedings of the National Academy of Sciences 109 (46), 18821-18826, 2012 | 50 | 2012 |
| Topological models of heteromeric protein assemblies from mass spectrometry: application to the yeast eIF3: eIF5 complex A Politis, C Schmidt, E Tjioe, AM Sandercock, K Lasker, Y Gordiyenko, ... Chemistry & biology 22 (1), 117-128, 2015 | 49 | 2015 |
| The molecular architecture of the yeast spindle pole body core determined by Bayesian integrative modeling S Viswanath, M Bonomi, SJ Kim, VA Klenchin, KC Taylor, KC Yabut, ... Molecular biology of the cell 28 (23), 3298-3314, 2017 | 47 | 2017 |
| Modeling of Proteins and Their Assemblies with the Integrative Modeling Platform B Webb, K Lasker, J Velázquez-Muriel, D Schneidman-Duhovny, ... Structural Genomics: General Applications, 277-295, 2014 | 41 | 2014 |
| A Computational Framework for Handling Motion. LJ Guibas, MI Karavelas, D Russel ALENEX/ANALC, 129-141, 2004 | 38 | 2004 |
| Kinetic data structures in practice D Russel Stanford University, 2007 | 37 | 2007 |
| Prediction of enzymatic pathways by integrative pathway mapping S Calhoun, M Korczynska, DJ Wichelecki, B San Francisco, S Zhao, ... Elife 7, e31097, 2018 | 36 | 2018 |
| Determining protein complex structures based on a Bayesian model of in vivo Förster resonance energy transfer (FRET) data M Bonomi, R Pellarin, SJ Kim, D Russel, BA Sundin, M Riffle, D Jaschob, ... Molecular & Cellular Proteomics 13 (11), 2812-2823, 2014 | 32 | 2014 |
| Modeling of proteins and their assemblies with the integrative modeling platform B Webb, K Lasker, D Schneidman-Duhovny, E Tjioe, J Phillips, SJ Kim, ... Network Biology: Methods and Applications, 377-397, 2011 | 31 | 2011 |
| Exploring protein folding trajectories using geometric spanners D Russel, L Guibas Biocomputing 2005, 40-51, 2005 | 23 | 2005 |
| Automated crystallographic ligand building using the medial axis transform of an electron-density isosurface J Aishima, DS Russel, LJ Guibas, PD Adams, AT Brunger Acta Crystallographica Section D: Biological Crystallography 61 (10), 1354-1363, 2005 | 21 | 2005 |
| A package for exact kinetic data structures and sweepline algorithms D Russel, MI Karavelas, LJ Guibas Computational Geometry 38 (1-2), 111-127, 2007 | 19 | 2007 |
| SAXS Merge: an automated statistical method to merge SAXS profiles using Gaussian processes YG Spill, SJ Kim, D Schneidman-Duhovny, D Russel, B Webb, A Sali, ... Journal of Synchrotron Radiation 21 (1), 203-208, 2014 | 14 | 2014 |
