William Stafford Noble
William Stafford Noble
Professor of Genome Sciences, University of Washington
Verified email at uw.edu - Homepage
TitleCited byYear
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
90042012
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
ENCODE Project Consortium
Nature 447 (7146), 799, 2007
48052007
MEME Suite: tools for motif discovery and searching
TL Bailey, M Boden, FA Buske, M Frith, CE Grant, L Clementi, J Ren, ...
Nucleic acids research 37 (suppl_2), W202-W208, 2009
41142009
Knowledge-based analysis of microarray gene expression data by using support vector machines
MPS Brown, WN Grundy, D Lin, N Cristianini, CW Sugnet, TS Furey, ...
Proceedings of the National Academy of Sciences 97 (1), 262-267, 2000
28942000
FIMO: scanning for occurrences of a given motif
CE Grant, TL Bailey, WS Noble
Bioinformatics 27 (7), 1017-1018, 2011
15012011
Assessing computational tools for the discovery of transcription factor binding sites
M Tompa, N Li, TL Bailey, GM Church, B De Moor, E Eskin, AV Favorov, ...
Nature biotechnology 23 (1), 137, 2005
14422005
The spectrum kernel: A string kernel for SVM protein classification
C Leslie, E Eskin, WS Noble
Biocomputing 2002, 564-575, 2001
12492001
Semi-supervised learning for peptide identification from shotgun proteomics datasets
L Käll, JD Canterbury, J Weston, WS Noble, MJ MacCoss
Nature methods 4 (11), 923, 2007
11112007
Quantifying similarity between motifs
S Gupta, JA Stamatoyannopoulos, TL Bailey, WS Noble
Genome biology 8 (2), R24, 2007
9972007
What is a support vector machine?
WS Noble
Nature biotechnology 24 (12), 1565, 2006
8532006
A three-dimensional model of the yeast genome
Z Duan, M Andronescu, K Schutz, S McIlwain, YJ Kim, C Lee, J Shendure, ...
Nature 465 (7296), 363, 2010
8032010
A statistical framework for genomic data fusion
GRG Lanckriet, T De Bie, N Cristianini, MI Jordan, WS Noble
Bioinformatics 20 (16), 2626-2635, 2004
7522004
Mismatch string kernels for discriminative protein classification
CS Leslie, E Eskin, A Cohen, J Weston, WS Noble
Bioinformatics 20 (4), 467-476, 2004
6682004
Kernel methods for predicting protein–protein interactions
A Ben-Hur, WS Noble
Bioinformatics 21 (suppl_1), i38-i46, 2005
6442005
Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors
J Wang, J Zhuang, S Iyer, XY Lin, TW Whitfield, MC Greven, BG Pierce, ...
Genome research 22 (9), 1798-1812, 2012
6142012
Machine learning applications in genetics and genomics
MW Libbrecht, WS Noble
Nature Reviews Genetics 16 (6), 321, 2015
5452015
Global mapping of protein-DNA interactions in vivo by digital genomic footprinting
JR Hesselberth, X Chen, Z Zhang, PJ Sabo, R Sandstrom, AP Reynolds, ...
Nature methods 6 (4), 283, 2009
5422009
Assigning significance to peptides identified by tandem mass spectrometry using decoy databases
L Käll, JD Storey, MJ MacCoss, WS Noble
Journal of proteome research 7 (01), 29-34, 2007
5332007
The MEME suite
TL Bailey, J Johnson, CE Grant, WS Noble
Nucleic acids research 43 (W1), W39-W49, 2015
4482015
Unsupervised pattern discovery in human chromatin structure through genomic segmentation
MM Hoffman, OJ Buske, J Wang, Z Weng, JA Bilmes, WS Noble
Nature methods 9 (5), 473, 2012
4322012
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