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Bowen Li
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A mechanistic Individual-based Model of microbial communities
PG Jayathilake, P Gupta, B Li, C Madsen, O Oyebamiji, ...
PloS one 12 (8), e0181965, 2017
632017
NUFEB: A massively parallel simulator for individual-based modelling of microbial communities
B Li, D Taniguchi, JP Gedara, V Gogulancea, R Gonzalez-Cabaleiro, ...
PLoS computational biology 15 (12), e1007125, 2019
322019
Gaussian process emulation of an individual-based model simulation of microbial communities
OK Oyebamiji, DJ Wilkinson, PG Jayathilake, TP Curtis, SP Rushton, B Li, ...
Journal of computational science 22, 69-84, 2017
232017
Individual based model links thermodynamics, chemical speciation and environmental conditions to microbial growth
V Gogulancea, R González-Cabaleiro, B Li, D Taniguchi, PG Jayathilake, ...
Frontiers in microbiology, 1871, 2019
142019
Modelling bacterial twitching in fluid flows: a CFD-DEM approach
PG Jayathilake, B Li, P Zuliani, T Curtis, J Chen
Scientific reports 9 (1), 1-10, 2019
102019
A Bayesian approach to modelling the impact of hydrodynamic shear stress on biofilm deformation
OK Oyebamiji, DJ Wilkinson, PG Jayathilake, SP Rushton, B Bridgens, ...
Plos one 13 (4), e0195484, 2018
102018
Bayesian emulation and calibration of an individual-based model of microbial communities
OK Oyebamiji, DJ Wilkinson, B Li, PG Jayathilake, P Zuliani, TP Curtis
Journal of computational science 30, 194-208, 2019
92019
SONCraft: A Tool for Construction, Simulation, and Analysis of Structured Occurrence Nets
B Li, B Randell, A Bhattacharyya, T Alharbi, M Koutny
2018 18th International Conference on Application of Concurrency to System …, 2018
8*2018
CFD–DEM modelling of biofilm streamer oscillations and their cohesive failure in fluid flow
Y Xia, PG Jayathilake, B Li, P Zuliani, J Chen
Biotechnology and Bioengineering 118 (2), 918-929, 2021
52021
Time in structured occurrence nets
A Bhattacharyya, B Li, B Randell
International Workshop on Petri Nets and Software Engineering (PNSE’16), 35-55, 2016
52016
Unfolding CSPT-nets
B Li, M Koutny
International Workshop on Petri Nets and Software Engineering (PNSE’15), 207-226, 2015
22015
Visualisation and analysis of complex behaviours using structured occurrence nets
B Li
Newcastle University, 2017
12017
Coupled CFD‐DEM modelling to predict how EPS affects bacterial biofilm deformation, recovery and detachment under flow conditions
Y Xia, PG Jayathilake, B Li, P Zuliani, D Deehan, J Longyear, P Stoodley, ...
Biotechnology and Bioengineering, 2022
2022
Modelling and Optimisation of a DNA Stack Nano-Device Using Probabilistic Model Checking
B Li, N Mackenzie, B Shirt-Ediss, N Krasnogor, P Zuliani
28th International Conference on DNA Computing and Molecular Programming …, 2022
2022
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