Agnieszka Rybarczyk

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Citations	441	298
h-index	14	11
i10-index	19	12

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Jacek BlazewiczProfesor informatyki, Politechnika PoznanskaVerified email at cs.put.poznan.pl
Marcin RadomPoznan University of Technology, Institute of Computing ScienceVerified email at cs.put.poznan.pl
Marta SzachniukProfessor; Institute of Bioorganic Chemistry PAS and Poznan University of TechnologyVerified email at cs.put.poznan.pl
Tomasz ZokPoznan University of TechnologyVerified email at cs.put.poznan.pl
Maciej AntczakAssociate Professor at Institute of Computing Science, Poznan University of TechnologyVerified email at cs.put.poznan.pl
Natalia SzóstakInstitute of Bioorganic Chemistry Polish Academy of SciencesVerified email at ibch.poznan.pl
Marta KasprzakPoznan University of Technology, Institute of Computing ScienceVerified email at put.poznan.pl
Mariusz PopendaDr chemii, PANVerified email at ibch.poznan.pl
Zofia Szweykowska-KulinskaAdam Mickiewicz UniversityVerified email at amu.edu.pl
Kamila Jankowiak-Siuda, Kamila Jank...Verified email at swps.edu.pl
Piotr FormanowiczAssociate Professor at Institute of Computing Science, Poznan University of TechnologyVerified email at cs.put.poznan.pl
Agnieszka Żmieńko1) Institute of Bioorganic Chemistry Polish Academy of Sciences, Poznan, Poland; 2) Institute ofVerified email at ibch.poznan.pl
Falcon-PerezCIC bioGUNEVerified email at cicbiogune.es
Renzo KottmannSenator für FinanzenVerified email at finanzen.bremen.de
Prof. Dr. Frank Oliver GlöcknerAlfred Wegener Institute Bremerhaven, MARUM, University of BremenVerified email at awi.de
Adam KozakInstitute of Computing Science, Poznan University of TechnologyVerified email at cs.put.poznan.pl
Ireneusz J. OdrzykoskiAdam Mickiewicz University, Poznan, PolandVerified email at amu.edu.pl
Piotr LukasiakAssociate Professor, Institute of Computing Science, Poznan University of TechnologyVerified email at put.poznan.pl
Maciej MiłostanPoznan University of Technology, Institute of Computing ScienceVerified email at cs.put.poznan.pl
Agata BudkowskaPasteur InstituteVerified email at pasteur.fr

Agnieszka Rybarczyk

Poznan University of Technology; Gdynia Maritime University

Verified email at cs.put.poznan.pl

computational biology


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Sorting signal targeting mRNA into hepatic extracellular vesicles N Szostak, F Royo, A Rybarczyk, M Szachniuk, J Blazewicz, A del Sol, ... RNA biology 11 (7), 836-844, 2014	46	2014
The role of Fenton reaction in ROS-induced toxicity underlying atherosclerosis–modeled and analyzed using a Petri net-based approach D Formanowicz, M Radom, A Rybarczyk, P Formanowicz Biosystems 165, 71-87, 2018	43	2018
New in silico approach to assessing RNA secondary structures with non-canonical base pairs A Rybarczyk, N Szostak, M Antczak, T Zok, M Popenda, R Adamiak, ... BMC bioinformatics 16, 1-12, 2015	38	2015
Holmes: A graphical tool for development, simulation and analysis of Petri net based models of complex biological systems M Radom, A Rybarczyk, B Szawulak, H Andrzejewski, P Chabelski, ... Bioinformatics 33 (23), 3822-3823, 2017	26	2017
A role of inflammation and immunity in essential hypertension—modeled and analyzed using Petri nets D Formanowicz, A Rybarczyk, M Radom, P Formanowicz International Journal of Molecular Sciences 21 (9), 3348, 2020	25	2020
AmiRNA Designer-new method of artificial miRNA design A Mickiewicz, A Rybarczyk, J Sarzynska, M Figlerowicz, J Blazewicz Acta Biochimica Polonica 63 (1), 71-77, 2016	24	2016
Organellar inheritance in the allopolyploid moss Rhizomnium pseudopunctatum K Jankowiak, A Rybarczyk, R Wyatt, I Odrzykoski, A Pacak, ... Taxon 54 (2), 383-388, 2005	23	2005
RNAvista: a webserver to assess RNA secondary structures with non-canonical base pairs M Antczak, M Zablocki, T Zok, A Rybarczyk, J Blazewicz, M Szachniuk Bioinformatics 10, 2018	19	2018
Removal of persistent sulfamethoxazole and carbamazepine from water by horseradish peroxidase encapsulated into poly (vinyl chloride) electrospun fibers J Zdarta, O Degórska, K Jankowska, A Rybarczyk, A Piasecki, ... International Journal of Molecular Sciences 23 (1), 272, 2021	18	2021
Computational pipeline for reference-free comparative analysis of RNA 3D structures applied to SARS-CoV-2 UTR models J Gumna, M Antczak, RW Adamiak, JM Bujnicki, SJ Chen, F Ding, ... International Journal of Molecular Sciences 23 (17), 9630, 2022	16	2022
A stochastic petri net-based model of the involvement of interleukin 18 in atherosclerosis D Formanowicz, A Rybarczyk, M Radom, K Tanaś, P Formanowicz International journal of molecular sciences 21 (22), 8574, 2020	14	2020
2D-PAGE as an effective method of RNA degradome analysis M Nowacka, P Jackowiak, A Rybarczyk, T Magacz, PM Strozycki, ... Molecular Biology Reports 39, 139-146, 2012	14	2012
RNA partial degradation problem: motivation, complexity, algorithm J Blazewicz, M Figlerowicz, M Kasprzak, M Nowacka, A Rybarczyk Journal of Computational Biology 18 (6), 821-834, 2011	14	2011
A COMPARISON OF GROUP II INTRONS OF PLASTID tRNA^ L^ y^ s~ U~ U~ U GENES ENCODING MATURASE PROTEIN K Jankowiak, J Lesicka, A Pacak, A Rybarczyk, Z Szweykowska-Kulinska CELLULAR AND MOLECULAR BIOLOGY LETTERS. 9 (2), 239-252, 2004	14	2004
Modeling of the catalytic core of Arabidopsis thaliana Dicer-like 4 protein and its complex with double-stranded RNA A Mickiewicz, J Sarzyńska, M Miłostan, A Kurzyńska-Kokorniak, ... Computational Biology and Chemistry 66, 44-56, 2017	13	2017
RNA-Seq-based analysis of differential gene expression associated with hepatitis C virus infection in a cell culture A Hojka-Osinska, L Budzko, A Zmienko, A Rybarczyk, P Maillard, ... Acta Biochimica Polonica 63 (4), 789-798, 2016	12	2016
Poseidon: An information retrieval and extraction system for metagenomic marine science M Radom, A Rybarczyk, R Kottmann, P Formanowicz, M Szachniuk, ... Ecological Informatics 12, 10-15, 2012	11	2012
Translational and structural analysis of the shortest legume ENOD40 gene in Lupinus luteus J Podkowinski, A Zmienko, B Florek, P Wojciechowski, A Rybarczyk, ... Acta Biochimica Polonica 56 (1), 89-102, 2009	11	2009
Control of cholesterol metabolism using a systems approach D Formanowicz, M Radom, A Rybarczyk, K Tanaś, P Formanowicz Biology 11 (3), 430, 2022	10	2022
Tabu search for the RNA partial degradation problem A Rybarczyk, A Hertz, M Kasprzak, J Blazewicz International Journal of Applied Mathematics and Computer Science 27 (2 …, 2017	8	2017

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